(113 nodes) Ribosome network (Latimeria chalumnae)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC102359332	Uncharacterized protein. (179 aa)
	RPS11	Ribosomal protein S11; Belongs to the universal ribosomal protein uS17 family. (158 aa)
	RPL15	Ribosomal protein L15; Belongs to the eukaryotic ribosomal protein eL15 family. (204 aa)
	MRPL16	Mitochondrial ribosomal protein L16; Belongs to the universal ribosomal protein uL16 family. (251 aa)
	MRPL35	Mitochondrial ribosomal protein L35. (184 aa)
	MRPL9	Mitochondrial ribosomal protein L9. (248 aa)
	RPL37	Ribosomal protein L37; Binds to the 23S rRNA. (96 aa)
	RPS4X	40S ribosomal protein S4; Belongs to the eukaryotic ribosomal protein eS4 family. (263 aa)
	RPSA	40S ribosomal protein SA; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits. Also functions as a cell surface receptor for laminin. Plays a role in cell adhesion to the basement membrane and in the consequent activation of signaling transduction pathways. May play a role in cell fate determination and tissue morphogenesis. Belongs to the universal ribosomal protein uS2 family. (313 aa)
	MRPS7	Mitochondrial ribosomal protein S7. (242 aa)
	MRPL22	Mitochondrial ribosomal protein L22; Belongs to the universal ribosomal protein uL22 family. (199 aa)
	RPL7	Ribosomal protein L7. (230 aa)
	RPL35A	Ribosomal protein L35a. (110 aa)
	RPS20	Ribosomal_S10 domain-containing protein. (119 aa)
	MRPL36	Ribosomal protein; Belongs to the bacterial ribosomal protein bL36 family. (115 aa)
	LOC102348310	Uncharacterized protein; Belongs to the universal ribosomal protein uL14 family. (141 aa)
	LOC102356981	Uncharacterized protein. (140 aa)
	RPL9	Ribosomal protein L9. (194 aa)
	RPLP2	Ribosomal protein, large P2; Belongs to the eukaryotic ribosomal protein P1/P2 family. (112 aa)
	RPS3	KH type-2 domain-containing protein; Belongs to the universal ribosomal protein uS3 family. (254 aa)
	RPL4	Ribosomal protein L4. (360 aa)
	LOC102364941	Ribosomal protein L34. (118 aa)
	LOC102350741	Ribosomal protein L23; Belongs to the universal ribosomal protein uL14 family. (140 aa)
	RPL8	Ribosomal_L2_C domain-containing protein. (257 aa)
	RPL6	Ribosomal_L6e_N domain-containing protein. (263 aa)
	MRPS11	Mitochondrial ribosomal protein S11; Belongs to the universal ribosomal protein uS11 family. (198 aa)
	FAU	40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family. (133 aa)
	LOC102359058	KOW domain-containing protein. (145 aa)
	RPS27A	Ribosomal protein S27a. (156 aa)
	RPL27	60S ribosomal protein L27; Belongs to the eukaryotic ribosomal protein eL27 family. (136 aa)
	RPS27	40S ribosomal protein S27. (84 aa)
	KXD1	Ubiquitin-like domain-containing protein. (231 aa)
	MRPL1	Mitochondrial ribosomal protein L1. (328 aa)
	MRPS10	Mitochondrial ribosomal protein S10. (218 aa)
	RPL17	Ribosomal protein L17; Belongs to the universal ribosomal protein uL22 family. (184 aa)
	RPL39	Ribosomal protein L39. (51 aa)
	MRPL34	Mitochondrial ribosomal protein L34. (134 aa)
	MRPL4	Mitochondrial ribosomal protein L4. (327 aa)
	RPL30	Ribosomal protein L30. (115 aa)
	MRPS14	Mitochondrial ribosomal protein S14. (143 aa)
	RPS15	Ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family. (151 aa)
	LOC102360432	Ribosomal protein S13; Belongs to the universal ribosomal protein uS15 family. (151 aa)
	MRPL14	Mitochondrial ribosomal protein L14. (145 aa)
	RPS5	Ribosomal protein S5; Belongs to the universal ribosomal protein uS7 family. (203 aa)
	RPS3A	40S ribosomal protein S3a; Belongs to the eukaryotic ribosomal protein eS1 family. (264 aa)
	MRPL19	Mitochondrial ribosomal protein L19. (295 aa)
	RPS6	40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family. (249 aa)
	RPL11	Ribosomal protein L11; Belongs to the universal ribosomal protein uL5 family. (184 aa)
	RPL5	Ribosomal protein L5. (296 aa)
	RPS18	Ribosomal protein S18; Belongs to the universal ribosomal protein uS13 family. (128 aa)
	H3AS61_LATCH	S10_plectin domain-containing protein. (174 aa)
	RPS9	Ribosomal protein S9; Belongs to the universal ribosomal protein uS4 family. (139 aa)
	MRPS21	Mitochondrial ribosomal protein S21. (87 aa)
	MRPS18C	Mitochondrial ribosomal protein S18C; Belongs to the bacterial ribosomal protein bS18 family. (128 aa)
	RPS15A	Uncharacterized protein. (106 aa)
	MRPL23	Mitochondrial ribosomal protein L23. (163 aa)
	RPL37A	Ribosomal protein L37a. (92 aa)
	RPS26	40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family. (118 aa)
	MRPL18	Mitochondrial ribosomal protein L18. (191 aa)
	RPS24	40S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family. (178 aa)
	LOC102356691	Uncharacterized protein; Belongs to the eukaryotic ribosomal protein P1/P2 family. (112 aa)
	RPS27L	40S ribosomal protein S27. (84 aa)
	RPL21	Ribosomal protein L21. (160 aa)
	RPS21	40S ribosomal protein S21; Belongs to the eukaryotic ribosomal protein eS21 family. (83 aa)
	RPL3L	Ribosomal protein L3 like; Belongs to the universal ribosomal protein uL3 family. (407 aa)
	MRPL30	Mitochondrial ribosomal protein L30. (160 aa)
	RPS2	Ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family. (290 aa)
	RPL31	Ribosomal protein L31. (131 aa)
	MRPL32	Mitochondrial ribosomal protein L32. (179 aa)
	RPL32	Ribosomal protein L32. (135 aa)
	MRPS9	Mitochondrial ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family. (233 aa)
	RPL13	Ribosomal protein L13. (211 aa)
	RPS19	Ribosomal protein S19. (159 aa)
	RSL24D1	Ribosomal L24 domain containing 1. (165 aa)
	RPL19	Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family. (196 aa)
	RPL36	60S ribosomal protein L36; Belongs to the eukaryotic ribosomal protein eL36 family. (119 aa)
	MRPL27	Mitochondrial ribosomal protein L27. (150 aa)
	MRPL17	Mitochondrial ribosomal protein L17; Belongs to the bacterial ribosomal protein bL17 family. (180 aa)
	RPL12	Ribosomal protein L12; Belongs to the universal ribosomal protein uL11 family. (185 aa)
	MRPL13	Mitochondrial ribosomal protein L13; Belongs to the universal ribosomal protein uL13 family. (175 aa)
	RPS16	Ribosomal protein S16; Belongs to the universal ribosomal protein uS9 family. (202 aa)
	RPS23	Ribosomal protein S23; Belongs to the universal ribosomal protein uS12 family. (143 aa)
	RPS29	Ribosomal protein S29. (56 aa)
	RPL10A	Ribosomal protein; Belongs to the universal ribosomal protein uL1 family. (176 aa)
	RPS14	Ribosomal protein S14; Belongs to the universal ribosomal protein uS11 family. (163 aa)
	MRPL15	Mitochondrial ribosomal protein L15. (296 aa)
	RPS17	Ribosomal protein S17. (162 aa)
	RPL22	Uncharacterized protein. (124 aa)
	MRPL24	Mitochondrial ribosomal protein L24. (216 aa)
	RPL27A	Ribosomal protein L27a; Belongs to the universal ribosomal protein uL15 family. (148 aa)
	MRPL10	Mitochondrial ribosomal protein L10. (265 aa)
	RPL38	Uncharacterized protein; Belongs to the eukaryotic ribosomal protein eL38 family. (79 aa)
	RPS10	Ribosomal protein S10. (176 aa)
	RPL36AL	Ribosomal protein L36a like; Belongs to the eukaryotic ribosomal protein eL42 family. (106 aa)
	RPS25	40S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family. (124 aa)
	RPL29-2	60S ribosomal protein L29; Belongs to the eukaryotic ribosomal protein eL29 family. (68 aa)
	RPL7A	Ribosomal protein L7a. (277 aa)
	RPL18A	60S ribosomal protein L18a; Belongs to the eukaryotic ribosomal protein eL20 family. (176 aa)
	ENSLACP00000020854	Large subunit ribosomal protein L22e. (88 aa)
	LOC102360864	Ribosomal protein L26. (145 aa)
	MRPS12	Mitochondrial ribosomal protein S12; Belongs to the universal ribosomal protein uS12 family. (160 aa)
	RPLP0	60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10. (319 aa)
	MRPS15	Mitochondrial ribosomal protein S15; Belongs to the universal ribosomal protein uS15 family. (269 aa)
	MRPL21	Mitochondrial ribosomal protein L21. (206 aa)
	MRPS2	Mitochondrial ribosomal protein S2. (279 aa)
	MRPS17	Mitochondrial ribosomal protein S17. (143 aa)
	RPL13A	Ribosomal protein L13a; Belongs to the universal ribosomal protein uL13 family. (208 aa)
	MRPL20	Mitochondrial ribosomal protein L20; Belongs to the bacterial ribosomal protein bL20 family. (149 aa)
	MRPS16	Mitochondrial ribosomal protein S16. (137 aa)
	RPL35	Ribosomal protein L35. (123 aa)
	MRPL33	Mitochondrial ribosomal protein L33. (65 aa)
	LOC102345094	40S ribosomal protein S12; Belongs to the eukaryotic ribosomal protein eS12 family. (132 aa)
	MRPS18A	Mitochondrial ribosomal protein S18A. (171 aa)

Your Current Organism:

Latimeria chalumnae

NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSLACP00000020854	FAU	ENSLACP00000020854	ENSLACP00000008505	Large subunit ribosomal protein L22e.	40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.	0.999
ENSLACP00000020854	KXD1	ENSLACP00000020854	ENSLACP00000009213	Large subunit ribosomal protein L22e.	Ubiquitin-like domain-containing protein.	0.902
ENSLACP00000020854	LOC102345094	ENSLACP00000020854	ENSLACP00000023155	Large subunit ribosomal protein L22e.	40S ribosomal protein S12; Belongs to the eukaryotic ribosomal protein eS12 family.	0.960
ENSLACP00000020854	LOC102348310	ENSLACP00000020854	ENSLACP00000004982	Large subunit ribosomal protein L22e.	Uncharacterized protein; Belongs to the universal ribosomal protein uL14 family.	0.969
ENSLACP00000020854	LOC102350741	ENSLACP00000020854	ENSLACP00000007652	Large subunit ribosomal protein L22e.	Ribosomal protein L23; Belongs to the universal ribosomal protein uL14 family.	0.969
ENSLACP00000020854	LOC102356691	ENSLACP00000020854	ENSLACP00000014350	Large subunit ribosomal protein L22e.	Uncharacterized protein; Belongs to the eukaryotic ribosomal protein P1/P2 family.	0.958
ENSLACP00000020854	LOC102356981	ENSLACP00000020854	ENSLACP00000005355	Large subunit ribosomal protein L22e.	Uncharacterized protein.	0.919
ENSLACP00000020854	LOC102359058	ENSLACP00000020854	ENSLACP00000008597	Large subunit ribosomal protein L22e.	KOW domain-containing protein.	0.950
ENSLACP00000020854	LOC102359332	ENSLACP00000020854	ENSLACP00000000013	Large subunit ribosomal protein L22e.	Uncharacterized protein.	0.931
ENSLACP00000020854	LOC102360432	ENSLACP00000020854	ENSLACP00000011086	Large subunit ribosomal protein L22e.	Ribosomal protein S13; Belongs to the universal ribosomal protein uS15 family.	0.894
ENSLACP00000020854	LOC102360864	ENSLACP00000020854	ENSLACP00000020911	Large subunit ribosomal protein L22e.	Ribosomal protein L26.	0.950
ENSLACP00000020854	LOC102364941	ENSLACP00000020854	ENSLACP00000007090	Large subunit ribosomal protein L22e.	Ribosomal protein L34.	0.964
ENSLACP00000020854	MRPL1	ENSLACP00000020854	ENSLACP00000009306	Large subunit ribosomal protein L22e.	Mitochondrial ribosomal protein L1.	0.881
ENSLACP00000020854	MRPL13	ENSLACP00000020854	ENSLACP00000017559	Large subunit ribosomal protein L22e.	Mitochondrial ribosomal protein L13; Belongs to the universal ribosomal protein uL13 family.	0.947
ENSLACP00000020854	MRPL15	ENSLACP00000020854	ENSLACP00000018394	Large subunit ribosomal protein L22e.	Mitochondrial ribosomal protein L15.	0.969
ENSLACP00000020854	MRPL16	ENSLACP00000020854	ENSLACP00000002307	Large subunit ribosomal protein L22e.	Mitochondrial ribosomal protein L16; Belongs to the universal ribosomal protein uL16 family.	0.793
ENSLACP00000020854	MRPL22	ENSLACP00000020854	ENSLACP00000003768	Large subunit ribosomal protein L22e.	Mitochondrial ribosomal protein L22; Belongs to the universal ribosomal protein uL22 family.	0.944
ENSLACP00000020854	MRPL24	ENSLACP00000020854	ENSLACP00000018881	Large subunit ribosomal protein L22e.	Mitochondrial ribosomal protein L24.	0.915
ENSLACP00000020854	MRPL4	ENSLACP00000020854	ENSLACP00000010505	Large subunit ribosomal protein L22e.	Mitochondrial ribosomal protein L4.	0.938
ENSLACP00000020854	MRPS10	ENSLACP00000020854	ENSLACP00000009606	Large subunit ribosomal protein L22e.	Mitochondrial ribosomal protein S10.	0.918