STRINGSTRING
DCP2 DCP2 MPHOSPH6 MPHOSPH6 ENO2 ENO2 DCPS DCPS BTG2 BTG2 CNOT4 CNOT4 PARN PARN LOC102359475 LOC102359475 CNOT6L CNOT6L WDR61 WDR61 TOB1 TOB1 PABPC1L PABPC1L EXOSC3 EXOSC3 BTG3 BTG3 LSM6 LSM6 CNOT2 CNOT2 BTG1 BTG1 C1D C1D DIS3L DIS3L XRN2 XRN2 ZCCHC7 ZCCHC7 XRN1 XRN1 MTREX MTREX EXOSC4 EXOSC4 CNOT7 CNOT7 EXOSC8 EXOSC8 CNOT3 CNOT3 TTC37 TTC37 TENT4B TENT4B LSM8 LSM8 CNOT1 CNOT1 LSM1 LSM1 PNPT1 PNPT1 PABPC4 PABPC4 EXOSC7 EXOSC7 TOB2 TOB2 DCP1A DCP1A ENO3 ENO3 LSM2 LSM2 LOC102367138 LOC102367138 HSPD1 HSPD1 EXOSC2 EXOSC2 LSM7 LSM7 ENO1 ENO1 LSM4 LSM4 DHX36 DHX36 EXOSC10 EXOSC10 LOC102349397 LOC102349397 DDX6 DDX6 DCP1B DCP1B CNOT9 CNOT9 LOC102357564 LOC102357564 BTG4 BTG4 LSM5 LSM5 DIS3 DIS3
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
DCP2Decapping mRNA 2. (402 aa)
MPHOSPH6M-phase phosphoprotein 6. (162 aa)
ENO2Enolase 2. (376 aa)
DCPSDecapping enzyme, scavenger. (174 aa)
BTG2BTG anti-proliferation factor 2. (149 aa)
CNOT4CCR4-NOT transcription complex subunit 4. (764 aa)
PARNPoly(A)-specific ribonuclease. (529 aa)
LOC102359475Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. (668 aa)
CNOT6LCCR4-NOT transcription complex subunit 6 like. (553 aa)
WDR61WD_REPEATS_REGION domain-containing protein. (305 aa)
TOB1Transducer of ERBB2, 1. (323 aa)
PABPC1LPolyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. (639 aa)
EXOSC3Exosome component 3. (244 aa)
BTG3BTG anti-proliferation factor 3. (187 aa)
LSM6LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated. (80 aa)
CNOT2CCR4-NOT transcription complex subunit 2. (534 aa)
BTG1BTG anti-proliferation factor 1. (171 aa)
C1DC1D nuclear receptor corepressor. (149 aa)
DIS3LDIS3 like exosome 3'-5' exoribonuclease. (1060 aa)
XRN25'-3' exoribonuclease; Possesses 5'->3' exoribonuclease activity. May promote termination of transcription by RNA polymerase II. (921 aa)
ZCCHC7Uncharacterized protein. (192 aa)
XRN15'-3' exoribonuclease 1. (1737 aa)
MTREXMtr4 exosome RNA helicase. (1031 aa)
EXOSC4Exosome component 4. (129 aa)
CNOT7CCR4-NOT transcription complex subunit 7. (286 aa)
EXOSC8Exosome component 8. (243 aa)
CNOT3CCR4-NOT transcription complex subunit 3. (727 aa)
TTC37Tetratricopeptide repeat domain 37. (1569 aa)
TENT4BTerminal nucleotidyltransferase 4B. (682 aa)
LSM8U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA. (96 aa)
CNOT1CCR4-NOT transcription complex subunit 1. (2413 aa)
LSM1U6 snRNA-associated Sm-like protein LSm1; Probably involved with other LSm subunits in the general process of degradation of mRNAs. (121 aa)
PNPT1Polyribonucleotide nucleotidyltransferase 1. (724 aa)
PABPC4Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. (638 aa)
EXOSC7Exosome component 7. (291 aa)
TOB2Transducer of ERBB2, 2. (330 aa)
DCP1ADecapping mRNA 1A. (597 aa)
ENO3Enolase 3. (434 aa)
LSM2U6 snRNA-associated Sm-like protein LSm2; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (95 aa)
LOC102367138DEAD (Asp-Glu-Ala-Asp) box helicase 61; Belongs to the DEAD box helicase family. (480 aa)
HSPD1Heat shock protein family D (Hsp60) member 1; Belongs to the chaperonin (HSP60) family. (565 aa)
EXOSC2Exosome component 2. (293 aa)
LSM7LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated. (103 aa)
ENO1Enolase 1. (438 aa)
LSM4U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (140 aa)
DHX36DEAH-box helicase 36. (1001 aa)
EXOSC10Exosome component 10. (910 aa)
LOC102349397Uncharacterized protein. (574 aa)
DDX6DEAD-box helicase 6; Belongs to the DEAD box helicase family. (485 aa)
DCP1BDecapping mRNA 1B. (600 aa)
CNOT9CCR4-NOT transcription complex subunit 9. (299 aa)
LOC102357564Si:dkey-42i9.4. (167 aa)
BTG4BTG anti-proliferation factor 4. (231 aa)
LSM5U6 snRNA-associated Sm-like protein LSm5; Plays a role in U6 snRNP assembly and function. Binds to the 3' end of U6 snRNA. (91 aa)
DIS3DIS3 homolog, exosome endoribonuclease and 3'-5' exoribonuclease; Belongs to the RNR ribonuclease family. (959 aa)
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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