STRINGSTRING
W5LXJ3_LEPOC W5LXJ3_LEPOC rfc4 rfc4 rfc2 rfc2 W5M103_LEPOC W5M103_LEPOC pola1 pola1 pold3 pold3 pole3 pole3 W5M4G9_LEPOC W5M4G9_LEPOC W5M4I8_LEPOC W5M4I8_LEPOC rfc5 rfc5 pole4 pole4 pole pole W5M9K5_LEPOC W5M9K5_LEPOC W5M9S6_LEPOC W5M9S6_LEPOC prim1 prim1 rfc3 rfc3 pole2 pole2 rfc1 rfc1 pold2 pold2 pcna pcna prim2 prim2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
W5LXJ3_LEPOCDNA_pol_B domain-containing protein. (97 aa)
rfc4Replication factor C (activator 1) 4. (359 aa)
rfc2Replication factor C (activator 1) 2. (358 aa)
W5M103_LEPOCDNA ligase. (1030 aa)
pola1DNA polymerase. (1486 aa)
pold3Polymerase (DNA-directed), delta 3, accessory subunit. (473 aa)
pole3Polymerase (DNA directed), epsilon 3 (p17 subunit). (148 aa)
W5M4G9_LEPOCDNA_pol_E_B domain-containing protein. (66 aa)
W5M4I8_LEPOCUncharacterized protein. (168 aa)
rfc5Replication factor C (activator 1) 5. (367 aa)
pole4Polymerase (DNA-directed), epsilon 4, accessory subunit; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (135 aa)
poleDNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family. (2298 aa)
W5M9K5_LEPOCRAD17 checkpoint clamp loader component. (584 aa)
W5M9S6_LEPOCXPGI domain-containing protein. (345 aa)
prim1DNA primase; Belongs to the eukaryotic-type primase small subunit family. (426 aa)
rfc3Replication factor C (activator 1) 3. (356 aa)
pole2DNA polymerase epsilon subunit; Participates in DNA repair and in chromosomal DNA replication; Belongs to the DNA polymerase epsilon subunit B family. (527 aa)
rfc1Replication factor C subunit 1. (1204 aa)
pold2Polymerase (DNA directed), delta 2, regulatory subunit. (469 aa)
pcnaProliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. (264 aa)
prim2DNA primase large subunit; Regulatory subunit of the DNA primase complex and component of the DNA polymerase alpha complex (also known as the alpha DNA polymerase-primase complex) which play an essential role in the initiation of DNA synthesis. The primase subunit of the polymerase alpha complex initiates DNA synthesis by oligomerising short RNA primers on both leading and lagging strands. (512 aa)
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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