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rpp30 rpp30 W5M1C9_LEPOC W5M1C9_LEPOC pop5 pop5 rpp21 rpp21 pop4 pop4 slc47a1 slc47a1 LOC102692108 LOC102692108 clg11h18orf21 clg11h18orf21 prorp prorp POP1 POP1 tmem167b tmem167b tsen15 tsen15 tsen54 tsen54 rpp40 rpp40 trmt10a trmt10a trmt10b trmt10b rpp14 rpp14 tsen2 tsen2 W5NDC9_LEPOC W5NDC9_LEPOC tmem203 tmem203 pop7 pop7 trmt10c trmt10c LOC102697955 LOC102697955 W5NP89_LEPOC W5NP89_LEPOC
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
rpp30Ribonuclease P/MRP 30 subunit. (266 aa)
W5M1C9_LEPOCtRNA-splicing endonuclease subunit Sen34; Constitutes one of the two catalytic subunit of the tRNA- splicing endonuclease complex, a complex responsible for identification and cleavage of the splice sites in pre-tRNA. It cleaves pre-tRNA at the 5'- and 3'-splice sites to release the intron. The products are an intron and two tRNA half-molecules bearing 2',3'-cyclic phosphate and 5'-OH termini. There are no conserved sequences at the splice sites, but the intron is invariably located at the same site in the gene, placing the splice sites an invariant distance from the constant structura [...] (279 aa)
pop5Ribonuclease P/MRP protein subunit POP5; Component of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5'-ends. (168 aa)
rpp21Ribonuclease P 21 subunit. (159 aa)
pop4Ribonuclease P protein subunit p29; Component of ribonuclease P, a ribonucleoprotein complex that generates mature tRNA molecules by cleaving their 5'-ends. (220 aa)
slc47a1Multidrug and toxin extrusion protein; Belongs to the multi antimicrobial extrusion (MATE) (TC 2.A.66.1) family. (588 aa)
LOC102692108Multidrug and toxin extrusion protein; Belongs to the multi antimicrobial extrusion (MATE) (TC 2.A.66.1) family. (598 aa)
clg11h18orf21Si:dkey-184p18.2. (222 aa)
prorpProtein only RNase P catalytic subunit. (500 aa)
POP1POP1 homolog, ribonuclease P/MRP subunit. (1009 aa)
tmem167bProtein kish; Involved in the early part of the secretory pathway. (74 aa)
tsen15TSEN15 tRNA splicing endonuclease subunit. (166 aa)
tsen54TSEN54 tRNA splicing endonuclease subunit. (532 aa)
rpp40Ribonuclease P/MRP 40 subunit. (363 aa)
trmt10atRNA methyltransferase 10A. (353 aa)
trmt10btRNA methyltransferase 10B. (341 aa)
rpp14Ribonuclease P/MRP protein subunit POP5; Component of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5'-ends. (120 aa)
tsen2tRNA-splicing endonuclease subunit Sen2; Constitutes one of the two catalytic subunit of the tRNA- splicing endonuclease complex, a complex responsible for identification and cleavage of the splice sites in pre-tRNA. It cleaves pre-tRNA at the 5'- and 3'-splice sites to release the intron. The products are an intron and two tRNA half-molecules bearing 2',3'-cyclic phosphate and 5'-OH termini. There are no conserved sequences at the splice sites, but the intron is invariably located at the same site in the gene, placing the splice sites an invariant distance from the constant structural [...] (473 aa)
W5NDC9_LEPOCRibonuclease P and MRP subunit p25, b. (166 aa)
tmem203Transmembrane protein 203. (138 aa)
pop7Ribonuclease P protein subunit p20; Component of ribonuclease P, a ribonucleoprotein complex that generates mature tRNA molecules by cleaving their 5'-ends. Also a component of the MRP ribonuclease complex, which cleaves pre-rRNA sequences. (149 aa)
trmt10ctRNA methyltransferase 10C, mitochondrial RNase P subunit. (445 aa)
LOC102697955Ribonuclease P/MRP 25 subunit-like. (189 aa)
W5NP89_LEPOCRibonuclease P/MRP 38 subunit. (284 aa)
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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