STRINGSTRING
eif4a2 eif4a2 eif4h eif4h pabpc4 pabpc4 W5M5H2_LEPOC W5M5H2_LEPOC W5M765_LEPOC W5M765_LEPOC W5M8G5_LEPOC W5M8G5_LEPOC PAN2 PAN2 pan3 pan3 W5ME38_LEPOC W5ME38_LEPOC W5ML68_LEPOC W5ML68_LEPOC EIF4G1 EIF4G1 LOC102697157 LOC102697157 PABPC3 PABPC3 ddx4 ddx4 eif4e eif4e paip1 paip1 eif4a1 eif4a1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
eif4a2Eukaryotic translation initiation factor 4A2; Belongs to the DEAD box helicase family. (411 aa)
eif4hEukaryotic translation initiation factor 4h. (261 aa)
pabpc4Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. (635 aa)
W5M5H2_LEPOCUncharacterized protein. (160 aa)
W5M765_LEPOCEukaryotic translation initiation factor 4 gamma, 3b. (1716 aa)
W5M8G5_LEPOCEukaryotic translation initiation factor 4, gamma 2a. (940 aa)
PAN2PAN2-PAN3 deadenylation complex catalytic subunit PAN2; Catalytic subunit of the poly(A)-nuclease (PAN) deadenylation complex, one of two cytoplasmic mRNA deadenylases involved in general and miRNA-mediated mRNA turnover. PAN specifically shortens poly(A) tails of RNA and the activity is stimulated by poly(A)-binding protein (PABP). PAN deadenylation is followed by rapid degradation of the shortened mRNA tails by the CCR4-NOT complex. Deadenylated mRNAs are then degraded by two alternative mechanisms, namely exosome-mediated 3'-5' exonucleolytic degradation, or deadenlyation-dependent [...] (1211 aa)
pan3PAN2-PAN3 deadenylation complex subunit PAN3; Regulatory subunit of the poly(A)-nuclease (PAN) deadenylation complex, one of two cytoplasmic mRNA deadenylases involved in general and miRNA-mediated mRNA turnover. PAN specifically shortens poly(A) tails of RNA and the activity is stimulated by poly(A)-binding protein (PABP). PAN deadenylation is followed by rapid degradation of the shortened mRNA tails by the CCR4-NOT complex. Deadenylated mRNAs are then degraded by two alternative mechanisms, namely exosome-mediated 3'-5' exonucleolytic degradation, or deadenlyation-dependent mRNA deca [...] (915 aa)
W5ME38_LEPOCEukaryotic translation initiation factor 4Ba. (615 aa)
W5ML68_LEPOCPolyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. (635 aa)
EIF4G1Eukaryotic translation initiation factor 4 gamma 1. (1709 aa)
LOC102697157Eukaryotic translation initiation factor 4E family member 1c; Belongs to the eukaryotic initiation factor 4E family. (216 aa)
PABPC3Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. (640 aa)
ddx4DEAD (Asp-Glu-Ala-Asp) box polypeptide 4; Belongs to the DEAD box helicase family. (480 aa)
eif4eEukaryotic translation initiation factor 4eb; Belongs to the eukaryotic initiation factor 4E family. (241 aa)
paip1Poly(A) binding protein interacting protein 1. (477 aa)
eif4a1Eukaryotic translation initiation factor 4A1B; Belongs to the DEAD box helicase family. (411 aa)
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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