STRINGSTRING
W5LX21_LEPOC W5LX21_LEPOC ppl ppl MACF1 MACF1 W5MDW6_LEPOC W5MDW6_LEPOC krt18 krt18 pkp3 pkp3 W5MIE1_LEPOC W5MIE1_LEPOC W5MII0_LEPOC W5MII0_LEPOC LOC102688792 LOC102688792 LOC102688988 LOC102688988 W5MQ56_LEPOC W5MQ56_LEPOC W5MQ83_LEPOC W5MQ83_LEPOC pkp1 pkp1 W5N2M7_LEPOC W5N2M7_LEPOC dsp dsp evpl evpl W5NDN5_LEPOC W5NDN5_LEPOC perp perp
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
W5LX21_LEPOCUncharacterized protein. (97 aa)
pplPeriplakin. (1758 aa)
MACF1Microtubule actin crosslinking factor 1. (7590 aa)
W5MDW6_LEPOCKeratin 8; Belongs to the intermediate filament family. (547 aa)
krt18Keratin 18b; Belongs to the intermediate filament family. (450 aa)
pkp3Uncharacterized protein. (381 aa)
W5MIE1_LEPOCSi:ch73-74h11.1; Component of intercellular desmosome junctions. Involved in the interaction of plaque proteins and intermediate filaments mediating cell-cell adhesion. (733 aa)
W5MII0_LEPOCSi:ch73-74h11.1; Component of intercellular desmosome junctions. Involved in the interaction of plaque proteins and intermediate filaments mediating cell-cell adhesion. (1082 aa)
LOC102688792Uncharacterized protein; Component of intercellular desmosome junctions. Involved in the interaction of plaque proteins and intermediate filaments mediating cell-cell adhesion. (1172 aa)
LOC102688988Desmocollin 2 like; Component of intercellular desmosome junctions. Involved in the interaction of plaque proteins and intermediate filaments mediating cell-cell adhesion. (893 aa)
W5MQ56_LEPOCPlectin b. (4623 aa)
W5MQ83_LEPOCUncharacterized protein. (1470 aa)
pkp1Plakophilin 1b. (716 aa)
W5N2M7_LEPOCIF rod domain-containing protein; Belongs to the intermediate filament family. (488 aa)
dspDesmoplakin a. (2631 aa)
evplEnvoplakin a. (2000 aa)
W5NDN5_LEPOCUncharacterized protein. (844 aa)
perpP53 apoptosis effector related to pmp22. (187 aa)
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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