(33 nodes) Mixed, incl. Triglyceride lipase activity, and Triglyceride biosynthesis network (Lepisosteus oculatus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	W5LVU6_LEPOC	Patatin-like phospholipase domain containing 2. (365 aa)
	LOC102688341	Lecithin-cholesterol acyltransferase. (374 aa)
	ABHD5	Abhydrolase domain containing 5. (371 aa)
	W5LZD9_LEPOC	Zgc:123305. (945 aa)
	W5M5N5_LEPOC	O-acyltransferase. (423 aa)
	LOC102692780	Lipoprotein lipase. (499 aa)
	LOC102692977	PLAT domain-containing protein. (503 aa)
	LOC102687390	Lecithin-cholesterol acyltransferase. (430 aa)
	MOGAT1	Monoacylglycerol O-acyltransferase 1. (336 aa)
	tchp	Trichoplein, keratin filament binding. (499 aa)
	mogat2	Monoacylglycerol O-acyltransferase 2. (335 aa)
	dgat2	Diacylglycerol O-acyltransferase 2. (361 aa)
	LOC102683439	O-acyltransferase. (526 aa)
	cel	Carboxylic ester hydrolase; Belongs to the type-B carboxylesterase/lipase family. (557 aa)
	LOC102684990	Lipase; Belongs to the AB hydrolase superfamily. Lipase family. (397 aa)
	dgat1	O-acyltransferase. (509 aa)
	plpp4	Phospholipid phosphatase 4. (272 aa)
	LOC102683657	Phosphatidic acid phosphatase type 2D. (332 aa)
	PNLIPRP2	Triacylglycerol lipase; Belongs to the AB hydrolase superfamily. Lipase family. (471 aa)
	soat1	O-acyltransferase. (557 aa)
	PLPP1	Phospholipid phosphatase 1. (283 aa)
	W5MX48_LEPOC	PNPLA domain-containing protein. (389 aa)
	lpin2	Lipin 2. (942 aa)
	CLPS	Colipase. (121 aa)
	lipg	Lipase, endothelial. (497 aa)
	PNLIPRP2-2	Triacylglycerol lipase; Belongs to the AB hydrolase superfamily. Lipase family. (481 aa)
	mgll	Monoglyceride lipase. (313 aa)
	mogat3	Monoacylglycerol O-acyltransferase 3b. (163 aa)
	lipc	Lipase, hepatic b. (500 aa)
	ccdc115	Coiled-coil domain containing 115. (207 aa)
	W5ND55_LEPOC	Patatin-like phospholipase domain containing 3. (458 aa)
	lpin1	Lipin 1. (934 aa)
	W5NKI8_LEPOC	Diacylglycerol kinase. (656 aa)

Your Current Organism:

Lepisosteus oculatus

NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ABHD5	LOC102683439	ENSLOCP00000001332	ENSLOCP00000006985	Abhydrolase domain containing 5.	O-acyltransferase.	0.459
ABHD5	MOGAT1	ENSLOCP00000001332	ENSLOCP00000004923	Abhydrolase domain containing 5.	Monoacylglycerol O-acyltransferase 1.	0.499
ABHD5	W5LVU6_LEPOC	ENSLOCP00000001332	ENSLOCP00000000253	Abhydrolase domain containing 5.	Patatin-like phospholipase domain containing 2.	0.906
ABHD5	W5M5N5_LEPOC	ENSLOCP00000001332	ENSLOCP00000003693	Abhydrolase domain containing 5.	O-acyltransferase.	0.406
ABHD5	W5MX48_LEPOC	ENSLOCP00000001332	ENSLOCP00000012957	Abhydrolase domain containing 5.	PNPLA domain-containing protein.	0.846
ABHD5	W5ND55_LEPOC	ENSLOCP00000001332	ENSLOCP00000018564	Abhydrolase domain containing 5.	Patatin-like phospholipase domain containing 3.	0.906
ABHD5	dgat1	ENSLOCP00000001332	ENSLOCP00000009227	Abhydrolase domain containing 5.	O-acyltransferase.	0.459
ABHD5	dgat2	ENSLOCP00000001332	ENSLOCP00000005672	Abhydrolase domain containing 5.	Diacylglycerol O-acyltransferase 2.	0.604
ABHD5	mgll	ENSLOCP00000001332	ENSLOCP00000016102	Abhydrolase domain containing 5.	Monoglyceride lipase.	0.700
ABHD5	mogat2	ENSLOCP00000001332	ENSLOCP00000005648	Abhydrolase domain containing 5.	Monoacylglycerol O-acyltransferase 2.	0.499
ABHD5	mogat3	ENSLOCP00000001332	ENSLOCP00000016762	Abhydrolase domain containing 5.	Monoacylglycerol O-acyltransferase 3b.	0.499
ABHD5	soat1	ENSLOCP00000001332	ENSLOCP00000011939	Abhydrolase domain containing 5.	O-acyltransferase.	0.459
CLPS	LOC102692780	ENSLOCP00000013693	ENSLOCP00000004209	Colipase.	Lipoprotein lipase.	0.464
CLPS	LOC102692977	ENSLOCP00000013693	ENSLOCP00000004232	Colipase.	PLAT domain-containing protein.	0.464
CLPS	PNLIPRP2	ENSLOCP00000013693	ENSLOCP00000011700	Colipase.	Triacylglycerol lipase; Belongs to the AB hydrolase superfamily. Lipase family.	0.982
CLPS	PNLIPRP2-2	ENSLOCP00000013693	ENSLOCP00000013972	Colipase.	Triacylglycerol lipase; Belongs to the AB hydrolase superfamily. Lipase family.	0.982
CLPS	cel	ENSLOCP00000013693	ENSLOCP00000006987	Colipase.	Carboxylic ester hydrolase; Belongs to the type-B carboxylesterase/lipase family.	0.885
CLPS	lipc	ENSLOCP00000013693	ENSLOCP00000016772	Colipase.	Lipase, hepatic b.	0.568
CLPS	lipg	ENSLOCP00000013693	ENSLOCP00000013891	Colipase.	Lipase, endothelial.	0.446
CLPS	mogat3	ENSLOCP00000013693	ENSLOCP00000016762	Colipase.	Monoacylglycerol O-acyltransferase 3b.	0.491