(50 nodes) Sema domain, and G8 domain network (Lepisosteus oculatus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	W5LW20_LEPOC	Uncharacterized protein. (225 aa)
	LOC102683284	Sema domain-containing protein; Belongs to the semaphorin family. (844 aa)
	nrp1	Neuropilin; Belongs to the neuropilin family. (924 aa)
	SEMA4F	Ssemaphorin 4F; Belongs to the semaphorin family. (783 aa)
	W5M0L9_LEPOC	Uncharacterized protein. (302 aa)
	sema5b	Sema domain-containing protein. (1094 aa)
	PKHD1L1	PKHD1 like 1. (4008 aa)
	W5M623_LEPOC	CUB domain containing protein 2. (541 aa)
	c1qtnf5	C1q and TNF related 5. (249 aa)
	farp1	FERM, RhoGEF (ARHGEF) and pleckstrin domain protein 1 (chondrocyte-derived). (1040 aa)
	farp2	FERM, RhoGEF and pleckstrin domain protein 2. (1067 aa)
	mfrp	Membrane frizzled-related protein. (584 aa)
	LOC102696479	Si:ch211-129c21.1; Belongs to the semaphorin family. (813 aa)
	sema6b	Sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6Ba; Belongs to the semaphorin family. (903 aa)
	sema6c	Sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D; Belongs to the semaphorin family. (1065 aa)
	W5MMT4_LEPOC	Si:ch211-113g11.6; Belongs to the semaphorin family. (634 aa)
	W5MMY0_LEPOC	Transcobalamin II. (373 aa)
	sema6a	Sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A; Belongs to the semaphorin family. (1036 aa)
	cemip2	Cell migration inducing hyaluronidase 2. (1382 aa)
	AMN	Amnion associated transmembrane protein. (463 aa)
	W5MWQ1_LEPOC	Tyrosine-protein kinase; Belongs to the protein kinase superfamily. Tyr protein kinase family. Fes/fps subfamily. (828 aa)
	W5MX16_LEPOC	Cubilin (intrinsic factor-cobalamin receptor). (3634 aa)
	sema3f	Sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3Fb; Belongs to the semaphorin family. (792 aa)
	plxna2	Plexin A2. (1901 aa)
	W5MYV5_LEPOC	Neuropilin; Belongs to the neuropilin family. (912 aa)
	SEMA4D	Semaphorin 4D; Belongs to the semaphorin family. (893 aa)
	LOC102694927	G8 domain-containing protein. (1277 aa)
	cemip	Cell migration inducing hyaluronidase 1. (1361 aa)
	PLXND1	Plexin D1. (1899 aa)
	sema6d	Sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D, like; Belongs to the semaphorin family. (1079 aa)
	W5N7X9_LEPOC	Sema domain-containing protein. (1078 aa)
	W5N857_LEPOC	Plexin b1a. (2194 aa)
	plxna1	Plexin A1a. (1948 aa)
	LOC102698824	Sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3bl; Belongs to the semaphorin family. (780 aa)
	W5NAJ8_LEPOC	Sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3B; Belongs to the semaphorin family. (751 aa)
	W5NAV7_LEPOC	Sema domain-containing protein; Belongs to the semaphorin family. (260 aa)
	W5NAW0_LEPOC	Sema domain-containing protein; Belongs to the semaphorin family. (289 aa)
	PLXNA3	Plexin A3. (1899 aa)
	W5NBQ4_LEPOC	Plexin B3. (1754 aa)
	sema7a	Semaphorin 7A; Belongs to the semaphorin family. (625 aa)
	W5NDE2_LEPOC	Uncharacterized protein; Belongs to the semaphorin family. (593 aa)
	plxnb2	Plexin b2b. (1861 aa)
	sema4c	Uncharacterized protein; Belongs to the semaphorin family. (848 aa)
	plxna4	Plexin A4. (1893 aa)
	plxnc1	Plexin C1. (1509 aa)
	sema3c	Sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C; Belongs to the semaphorin family. (759 aa)
	sema3e	Sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3E; Belongs to the semaphorin family. (774 aa)
	sema3a	Sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3Ab; Belongs to the semaphorin family. (774 aa)
	sema3d	Sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3D; Belongs to the semaphorin family. (787 aa)
	W5NL21_LEPOC	Centrosomal protein 85, like. (793 aa)

Your Current Organism:

Lepisosteus oculatus

NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AMN	W5M623_LEPOC	ENSLOCP00000012026	ENSLOCP00000003831	Amnion associated transmembrane protein.	CUB domain containing protein 2.	0.950
AMN	W5MMY0_LEPOC	ENSLOCP00000012026	ENSLOCP00000009739	Amnion associated transmembrane protein.	Transcobalamin II.	0.697
AMN	W5MX16_LEPOC	ENSLOCP00000012026	ENSLOCP00000012925	Amnion associated transmembrane protein.	Cubilin (intrinsic factor-cobalamin receptor).	0.976
AMN	mfrp	ENSLOCP00000012026	ENSLOCP00000007826	Amnion associated transmembrane protein.	Membrane frizzled-related protein.	0.783
AMN	nrp1	ENSLOCP00000012026	ENSLOCP00000000887	Amnion associated transmembrane protein.	Neuropilin; Belongs to the neuropilin family.	0.778
LOC102683284	LOC102694927	ENSLOCP00000000364	ENSLOCP00000015765	Sema domain-containing protein; Belongs to the semaphorin family.	G8 domain-containing protein.	0.480
LOC102683284	LOC102696479	ENSLOCP00000000364	ENSLOCP00000007957	Sema domain-containing protein; Belongs to the semaphorin family.	Si:ch211-129c21.1; Belongs to the semaphorin family.	0.625
LOC102683284	PKHD1L1	ENSLOCP00000000364	ENSLOCP00000003556	Sema domain-containing protein; Belongs to the semaphorin family.	PKHD1 like 1.	0.480
LOC102683284	PLXNA3	ENSLOCP00000000364	ENSLOCP00000018006	Sema domain-containing protein; Belongs to the semaphorin family.	Plexin A3.	0.651
LOC102683284	PLXND1	ENSLOCP00000000364	ENSLOCP00000016052	Sema domain-containing protein; Belongs to the semaphorin family.	Plexin D1.	0.651
LOC102683284	SEMA4D	ENSLOCP00000000364	ENSLOCP00000014463	Sema domain-containing protein; Belongs to the semaphorin family.	Semaphorin 4D; Belongs to the semaphorin family.	0.622
LOC102683284	W5LW20_LEPOC	ENSLOCP00000000364	ENSLOCP00000000327	Sema domain-containing protein; Belongs to the semaphorin family.	Uncharacterized protein.	0.480
LOC102683284	W5M0L9_LEPOC	ENSLOCP00000000364	ENSLOCP00000001926	Sema domain-containing protein; Belongs to the semaphorin family.	Uncharacterized protein.	0.480
LOC102683284	W5M623_LEPOC	ENSLOCP00000000364	ENSLOCP00000003831	Sema domain-containing protein; Belongs to the semaphorin family.	CUB domain containing protein 2.	0.448
LOC102683284	W5MX16_LEPOC	ENSLOCP00000000364	ENSLOCP00000012925	Sema domain-containing protein; Belongs to the semaphorin family.	Cubilin (intrinsic factor-cobalamin receptor).	0.448
LOC102683284	W5N857_LEPOC	ENSLOCP00000000364	ENSLOCP00000016816	Sema domain-containing protein; Belongs to the semaphorin family.	Plexin b1a.	0.675
LOC102683284	W5NBQ4_LEPOC	ENSLOCP00000000364	ENSLOCP00000018063	Sema domain-containing protein; Belongs to the semaphorin family.	Plexin B3.	0.675
LOC102683284	cemip	ENSLOCP00000000364	ENSLOCP00000015774	Sema domain-containing protein; Belongs to the semaphorin family.	Cell migration inducing hyaluronidase 1.	0.480
LOC102683284	cemip2	ENSLOCP00000000364	ENSLOCP00000011666	Sema domain-containing protein; Belongs to the semaphorin family.	Cell migration inducing hyaluronidase 2.	0.480
LOC102683284	mfrp	ENSLOCP00000000364	ENSLOCP00000007826	Sema domain-containing protein; Belongs to the semaphorin family.	Membrane frizzled-related protein.	0.451