16 items (Lepisosteus oculatus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	cdc42	Cell division cycle 42. (195 aa)
	W5M0C9_LEPOC	Citron rho-interacting serine/threonine kinase a; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. (2023 aa)
	W5M828_LEPOC	PH domain-containing protein. (850 aa)
	W5M916_LEPOC	Formin-like 3. (934 aa)
	myo9b	Myosin IXb; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (2130 aa)
	W5ME91_LEPOC	IQ motif containing GTPase activating protein 2. (1619 aa)
	W5MEU0_LEPOC	Rho GTPase activating protein 1. (423 aa)
	anln	Anillin, actin binding protein. (1217 aa)
	rnd1	Rho family GTPase 1a. (232 aa)
	LOC102698253	Cell division cycle 42, like. (191 aa)
	LOC102693786	IQ motif containing GTPase activating protein 3. (1659 aa)
	rhov	Ras homolog family member V. (244 aa)
	iqgap1	IQ motif containing GTPase activating protein 1. (1656 aa)
	W5NAN1_LEPOC	Non-specific serine/threonine protein kinase. (718 aa)
	W5NCC0_LEPOC	FH2 domain-containing protein. (735 aa)
	myo9a	Myosin IXAa; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (2677 aa)

Your Current Organism:

Lepisosteus oculatus

NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC102693786	LOC102698253	ENSLOCP00000010638	ENSLOCP00000008990	IQ motif containing GTPase activating protein 3.	Cell division cycle 42, like.	0.931
LOC102693786	W5M0C9_LEPOC	ENSLOCP00000010638	ENSLOCP00000001836	IQ motif containing GTPase activating protein 3.	Citron rho-interacting serine/threonine kinase a; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family.	0.483
LOC102693786	W5M828_LEPOC	ENSLOCP00000010638	ENSLOCP00000004536	IQ motif containing GTPase activating protein 3.	PH domain-containing protein.	0.566
LOC102693786	W5M916_LEPOC	ENSLOCP00000010638	ENSLOCP00000004875	IQ motif containing GTPase activating protein 3.	Formin-like 3.	0.412
LOC102693786	W5ME91_LEPOC	ENSLOCP00000010638	ENSLOCP00000006700	IQ motif containing GTPase activating protein 3.	IQ motif containing GTPase activating protein 2.	0.788
LOC102693786	W5MEU0_LEPOC	ENSLOCP00000010638	ENSLOCP00000006899	IQ motif containing GTPase activating protein 3.	Rho GTPase activating protein 1.	0.609
LOC102693786	W5NAN1_LEPOC	ENSLOCP00000010638	ENSLOCP00000017690	IQ motif containing GTPase activating protein 3.	Non-specific serine/threonine protein kinase.	0.502
LOC102693786	W5NCC0_LEPOC	ENSLOCP00000010638	ENSLOCP00000018279	IQ motif containing GTPase activating protein 3.	FH2 domain-containing protein.	0.562
LOC102693786	anln	ENSLOCP00000010638	ENSLOCP00000008546	IQ motif containing GTPase activating protein 3.	Anillin, actin binding protein.	0.573
LOC102693786	cdc42	ENSLOCP00000010638	ENSLOCP00000001212	IQ motif containing GTPase activating protein 3.	Cell division cycle 42.	0.947
LOC102693786	myo9a	ENSLOCP00000010638	ENSLOCP00000018447	IQ motif containing GTPase activating protein 3.	Myosin IXAa; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	0.678
LOC102693786	myo9b	ENSLOCP00000010638	ENSLOCP00000004932	IQ motif containing GTPase activating protein 3.	Myosin IXb; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	0.675
LOC102693786	rhov	ENSLOCP00000010638	ENSLOCP00000015172	IQ motif containing GTPase activating protein 3.	Ras homolog family member V.	0.644
LOC102693786	rnd1	ENSLOCP00000010638	ENSLOCP00000008942	IQ motif containing GTPase activating protein 3.	Rho family GTPase 1a.	0.630
LOC102698253	LOC102693786	ENSLOCP00000008990	ENSLOCP00000010638	Cell division cycle 42, like.	IQ motif containing GTPase activating protein 3.	0.931
LOC102698253	W5M0C9_LEPOC	ENSLOCP00000008990	ENSLOCP00000001836	Cell division cycle 42, like.	Citron rho-interacting serine/threonine kinase a; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family.	0.543
LOC102698253	W5M828_LEPOC	ENSLOCP00000008990	ENSLOCP00000004536	Cell division cycle 42, like.	PH domain-containing protein.	0.536
LOC102698253	W5M916_LEPOC	ENSLOCP00000008990	ENSLOCP00000004875	Cell division cycle 42, like.	Formin-like 3.	0.859
LOC102698253	W5ME91_LEPOC	ENSLOCP00000008990	ENSLOCP00000006700	Cell division cycle 42, like.	IQ motif containing GTPase activating protein 2.	0.954
LOC102698253	W5MEU0_LEPOC	ENSLOCP00000008990	ENSLOCP00000006899	Cell division cycle 42, like.	Rho GTPase activating protein 1.	0.944