STRINGSTRING
pole4 pole4 W5M6I9_LEPOC W5M6I9_LEPOC spo11 spo11 LOC102697006 LOC102697006 smc4 smc4 rcc1 rcc1 W5M8B8_LEPOC W5M8B8_LEPOC pole pole RSPH1 RSPH1 timeless timeless mcrs1 mcrs1 SETX SETX mlh1 mlh1 phf12 phf12 W5MCA8_LEPOC W5MCA8_LEPOC ino80c ino80c sap130 sap130 orc6 orc6 W5ME26_LEPOC W5ME26_LEPOC NUFIP1 NUFIP1 tonsl tonsl mcm4 mcm4 W5MFX5_LEPOC W5MFX5_LEPOC SPIDR SPIDR ep400 ep400 orc1 orc1 ACTR5 ACTR5 rpa1 rpa1 smarcb1 smarcb1 rad9b rad9b prim1 prim1 pold3 pold3 W5M2C1_LEPOC W5M2C1_LEPOC pola1 pola1 lrwd1 lrwd1 kifap3 kifap3 cdc45 cdc45 W5M0N9_LEPOC W5M0N9_LEPOC orc4 orc4 W5LYW4_LEPOC W5LYW4_LEPOC chek1 chek1 fkbp6 fkbp6 gins2 gins2 mcm6 mcm6 W5LXJ3_LEPOC W5LXJ3_LEPOC sin3b sin3b W5LV53_LEPOC W5LV53_LEPOC W5ND19_LEPOC W5ND19_LEPOC SYCP2L SYCP2L LOC102696624 LOC102696624 LOC102695737 LOC102695737 HUS1 HUS1 gins4 gins4 smc2 smc2 mcm2 mcm2 znhit1 znhit1 W5N869_LEPOC W5N869_LEPOC atrx atrx W5N8X8_LEPOC W5N8X8_LEPOC actr8 actr8 W5NAB2_LEPOC W5NAB2_LEPOC pold2 pold2 actr6 actr6 blm blm ruvbl1 ruvbl1 W5NCA9_LEPOC W5NCA9_LEPOC W5NCB0_LEPOC W5NCB0_LEPOC W5NCB3_LEPOC W5NCB3_LEPOC LOC102697986 LOC102697986 ino80 ino80 smc3 smc3 helb helb W5NH47_LEPOC W5NH47_LEPOC nek2 nek2 W5NHZ7_LEPOC W5NHZ7_LEPOC pinx1 pinx1 gins1 gins1 W5NJV2_LEPOC W5NJV2_LEPOC W5NJX2_LEPOC W5NJX2_LEPOC prim2 prim2 W5NKF9_LEPOC W5NKF9_LEPOC mms22l mms22l rrs1 rrs1 psmc3ip psmc3ip sirt7 sirt7 W5NG96_LEPOC W5NG96_LEPOC ing3 ing3 mcm10 mcm10 W5NEJ9_LEPOC W5NEJ9_LEPOC W5NEJ3_LEPOC W5NEJ3_LEPOC LOC102689238 LOC102689238 tex11 tex11 rad51 rad51 ino80b ino80b mcm7 mcm7 W5N674_LEPOC W5N674_LEPOC ruvbl2 ruvbl2 pole3 pole3 W5M4D7_LEPOC W5M4D7_LEPOC W5M4G9_LEPOC W5M4G9_LEPOC W5M4H6_LEPOC W5M4H6_LEPOC W5M4I8_LEPOC W5M4I8_LEPOC W5M585_LEPOC W5M585_LEPOC suds3 suds3 ncapg ncapg W5N2L8_LEPOC W5N2L8_LEPOC W5M6C2_LEPOC W5M6C2_LEPOC gins3 gins3 uchl5 uchl5 W5ML00_LEPOC W5ML00_LEPOC W5MNA9_LEPOC W5MNA9_LEPOC W5MNK3_LEPOC W5MNK3_LEPOC W5MNX2_LEPOC W5MNX2_LEPOC wapl wapl W5MP54_LEPOC W5MP54_LEPOC W5MPK4_LEPOC W5MPK4_LEPOC anp32e anp32e W5MQE4_LEPOC W5MQE4_LEPOC brms1l brms1l BAZ1A BAZ1A LOC102698545 LOC102698545 W5MTP9_LEPOC W5MTP9_LEPOC smarcal1 smarcal1 W5MU76_LEPOC W5MU76_LEPOC orc2 orc2 LOC102691803 LOC102691803 rad50 rad50 W5MWS0_LEPOC W5MWS0_LEPOC W5MXE6_LEPOC W5MXE6_LEPOC W5MY44_LEPOC W5MY44_LEPOC W5MYF7_LEPOC W5MYF7_LEPOC smchd1 smchd1 rpa3 rpa3 ino80e ino80e W5MZK1_LEPOC W5MZK1_LEPOC W5N048_LEPOC W5N048_LEPOC pole2 pole2 lrif1 lrif1 LOC102683235 LOC102683235 rad1 rad1 dmc1 dmc1 topbp1 topbp1
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
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textmining
co-expression
protein homology
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pole4Polymerase (DNA-directed), epsilon 4, accessory subunit; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (135 aa)
W5M6I9_LEPOCSnf2-related CREBBP activator protein. (2439 aa)
spo11SPO11 initiator of meiotic double stranded breaks. (391 aa)
LOC102697006SIN3-HDAC complex associated factor, like. (217 aa)
smc4Structural maintenance of chromosomes protein. (1300 aa)
rcc1Regulator of chromosome condensation 1. (421 aa)
W5M8B8_LEPOCUncharacterized protein. (326 aa)
poleDNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family. (2298 aa)
RSPH1Radial spoke head component 1. (286 aa)
timelessTimeless circadian clock. (1225 aa)
mcrs1Microspherule protein 1. (469 aa)
SETXSenataxin. (2398 aa)
mlh1MutL homolog 1, colon cancer, nonpolyposis type 2 (E. coli). (760 aa)
phf12PHD finger protein 12a. (1018 aa)
W5MCA8_LEPOCNucleolar protein 6. (1105 aa)
ino80cINO80 complex subunit C. (219 aa)
sap130Sin3A-associated protein a. (1060 aa)
orc6Origin recognition complex, subunit 6. (256 aa)
W5ME26_LEPOCUncharacterized protein. (198 aa)
NUFIP1Nuclear FMR1 interacting protein 1. (514 aa)
tonslTonsoku-like, DNA repair protein. (1444 aa)
mcm4DNA helicase; Belongs to the MCM family. (678 aa)
W5MFX5_LEPOCHORMA domain-containing protein. (173 aa)
SPIDRScaffold protein involved in DNA repair. (961 aa)
ep400E1A binding protein p400. (3152 aa)
orc1Origin recognition complex subunit 1; Component of the origin recognition complex (ORC) that binds origins of replication. DNA-binding is ATP-dependent, however specific DNA sequences that define origins of replication have not been identified so far. ORC is required to assemble the pre-replication complex necessary to initiate DNA replication. (919 aa)
ACTR5Actin related protein 5; Belongs to the actin family. (492 aa)
rpa1Replication protein A subunit; As part of the heterotrimeric replication protein A complex (RPA/RP-A), binds and stabilizes single-stranded DNA intermediates, that form during DNA replication or upon DNA stress. It prevents their reannealing and in parallel, recruits and activates different proteins and complexes involved in DNA metabolism. Thereby, it plays an essential role both in DNA replication and the cellular response to DNA damage. (607 aa)
smarcb1SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1; Belongs to the SNF5 family. (387 aa)
rad9bRAD9 checkpoint clamp component B. (290 aa)
prim1DNA primase; Belongs to the eukaryotic-type primase small subunit family. (426 aa)
pold3Polymerase (DNA-directed), delta 3, accessory subunit. (473 aa)
W5M2C1_LEPOCDEAH (Asp-Glu-Ala-His) box helicase 9. (1268 aa)
pola1DNA polymerase. (1486 aa)
lrwd1Leucine-rich repeats and WD repeat domain containing 1. (743 aa)
kifap3Kinesin-associated protein 3b. (796 aa)
cdc45CDC45 cell division cycle 45 homolog (S. cerevisiae). (570 aa)
W5M0N9_LEPOCZinc finger, RAN-binding domain containing 3. (1142 aa)
orc4Origin recognition complex subunit 4; Component of the origin recognition complex (ORC) that binds origins of replication; Belongs to the ORC4 family. (434 aa)
W5LYW4_LEPOCNuclear factor related to kappaB binding protein. (1305 aa)
chek1Checkpoint kinase 1; Belongs to the protein kinase superfamily. (476 aa)
fkbp6Peptidylprolyl isomerase. (332 aa)
gins2DNA replication complex GINS protein PSF2; Belongs to the GINS2/PSF2 family. (186 aa)
mcm6DNA helicase; Belongs to the MCM family. (819 aa)
W5LXJ3_LEPOCDNA_pol_B domain-containing protein. (97 aa)
sin3bSIN3 transcription regulator family member B. (1155 aa)
W5LV53_LEPOCUncharacterized protein. (149 aa)
W5ND19_LEPOCSIN3 transcription regulator family member Aa. (1321 aa)
SYCP2LSynaptonemal complex protein 2 like. (777 aa)
LOC102696624Structure-specific endonuclease subunit SLX1; Catalytic subunit of the SLX1-SLX4 structure-specific endonuclease that resolves DNA secondary structures generated during DNA repair and recombination. Has endonuclease activity towards branched DNA substrates, introducing single-strand cuts in duplex DNA close to junctions with ss-DNA. (264 aa)
LOC102695737DNA helicase; Belongs to the MCM family. (834 aa)
HUS1Checkpoint protein; Belongs to the HUS1 family. (285 aa)
gins4DNA replication complex GINS protein SLD5; The GINS complex plays an essential role in the initiation of DNA replication; Belongs to the GINS4/SLD5 family. (225 aa)
smc2Structural maintenance of chromosomes protein. (1202 aa)
mcm2DNA helicase; Belongs to the MCM family. (887 aa)
znhit1Zinc finger, HIT-type containing 1. (154 aa)
W5N869_LEPOCSET domain containing 5. (1554 aa)
atrxATRX chromatin remodeler, like. (2427 aa)
W5N8X8_LEPOCTIMELESS-interacting protein; Plays an important role in the control of DNA replication and the maintenance of replication fork stability. Belongs to the CSM3 family. (323 aa)
actr8Actin-related protein 8; Plays an important role in the functional organization of mitotic chromosomes. Exhibits low basal ATPase activity, and unable to polymerize; Belongs to the actin family. ARP8 subfamily. (626 aa)
W5NAB2_LEPOCUncharacterized protein. (116 aa)
pold2Polymerase (DNA directed), delta 2, regulatory subunit. (469 aa)
actr6Actin related protein 6; Belongs to the actin family. (396 aa)
blmBLM RecQ like helicase. (1481 aa)
ruvbl1RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding. (270 aa)
W5NCA9_LEPOCSMC_N domain-containing protein. (150 aa)
W5NCB0_LEPOCUncharacterized protein. (121 aa)
W5NCB3_LEPOCUncharacterized protein. (150 aa)
LOC102697986DNA helicase; Belongs to the MCM family. (814 aa)
ino80INO80 complex ATPase subunit. (1554 aa)
smc3Structural maintenance of chromosomes protein. (1217 aa)
helbHelicase (DNA) B. (1126 aa)
W5NH47_LEPOCCleavage and polyadenylation specific factor 6. (583 aa)
nek2NIMA-related kinase 2. (437 aa)
W5NHZ7_LEPOCLeucine-rich pentatricopeptide repeat containing. (1473 aa)
pinx1PIN2 (TERF1) interacting telomerase inhibitor 1. (348 aa)
gins1GINS complex subunit 1 (Psf1 homolog). (196 aa)
W5NJV2_LEPOCMeiosis-specific, MEI4 homolog (S. cerevisiae). (372 aa)
W5NJX2_LEPOCOrigin recognition complex, subunit 3. (728 aa)
prim2DNA primase large subunit; Regulatory subunit of the DNA primase complex and component of the DNA polymerase alpha complex (also known as the alpha DNA polymerase-primase complex) which play an essential role in the initiation of DNA synthesis. The primase subunit of the polymerase alpha complex initiates DNA synthesis by oligomerising short RNA primers on both leading and lagging strands. (512 aa)
W5NKF9_LEPOCStructural maintenance of chromosomes protein. (1233 aa)
mms22lMMS22-like, DNA repair protein. (1238 aa)
rrs1Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family. (342 aa)
psmc3ipPSMC3 interacting protein. (214 aa)
sirt7Sirtuin 7. (437 aa)
W5NG96_LEPOCDNA helicase; Belongs to the MCM family. (815 aa)
ing3Inhibitor of growth protein. (418 aa)
mcm10Minichromosome maintenance 10 replication initiation factor. (867 aa)
W5NEJ9_LEPOCLysine (K)-specific methyltransferase 2E. (1307 aa)
W5NEJ3_LEPOCOrigin recognition complex, subunit 5. (375 aa)
LOC102689238Condensin complex subunit 2; Regulatory subunit of the condensin complex, a complex required for conversion of interphase chromatin into mitotic-like condense chromosomes. (763 aa)
tex11Testis expressed 11. (922 aa)
rad51DNA repair protein RAD51 homolog; Plays an important role in homologous strand exchange, a key step in DNA repair through homologous recombination. Binds to single and double-stranded DNA and exhibits DNA-dependent ATPase activity. Catalyzes the recognition of homology and strand exchange between homologous DNA partners to form a joint molecule between a processed DNA break and the repair template. Binds to single-stranded DNA in an ATP-dependent manner to form nucleoprotein filaments which are essential for the homology search and strand exchange. Belongs to the RecA family. RAD51 sub [...] (341 aa)
ino80bINO80 complex subunit B. (329 aa)
mcm7DNA replication licensing factor MCM7; Acts as component of the mcm2-7 complex (mcm complex) which is the putative replicative helicase essential for 'once per cell cycle' DNA replication initiation and elongation in eukaryotic cells. The active ATPase sites in the mcm2-7 ring are formed through the interaction surfaces of two neighboring subunits such that a critical structure of a conserved arginine finger motif is provided in trans relative to the ATP-binding site of the Walker A box of the adjacent subunit. The six ATPase active sites, however, are likely to contribute differential [...] (721 aa)
W5N674_LEPOCUncharacterized protein. (277 aa)
ruvbl2RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding. (463 aa)
pole3Polymerase (DNA directed), epsilon 3 (p17 subunit). (148 aa)
W5M4D7_LEPOCSLX4 structure-specific endonuclease subunit homolog (S. cerevisiae). (1669 aa)
W5M4G9_LEPOCDNA_pol_E_B domain-containing protein. (66 aa)
W5M4H6_LEPOCDNA methyltransferase 1 associated protein 1. (430 aa)
W5M4I8_LEPOCUncharacterized protein. (168 aa)
W5M585_LEPOCUncharacterized protein. (715 aa)
suds3SDS3 homolog, SIN3A corepressor complex component. (319 aa)
ncapgNon-SMC condensin I complex, subunit G. (1039 aa)
W5N2L8_LEPOCWD repeat and HMG-box DNA binding protein 1. (1133 aa)
W5M6C2_LEPOCUncharacterized protein. (318 aa)
gins3GINS complex subunit 3. (211 aa)
uchl5Ubiquitin carboxyl-terminal hydrolase. (330 aa)
W5ML00_LEPOCCell division cycle associated 7a. (393 aa)
W5MNA9_LEPOCPre-mRNA processing factor 19. (465 aa)
W5MNK3_LEPOCTower domain-containing protein. (871 aa)
W5MNX2_LEPOCUncharacterized protein. (298 aa)
waplWAPL cohesin release factor a. (1204 aa)
W5MP54_LEPOCSynaptonemal complex central element protein 2. (141 aa)
W5MPK4_LEPOCTIMELESS-interacting protein; Plays an important role in the control of DNA replication and the maintenance of replication fork stability. Belongs to the CSM3 family. (151 aa)
anp32eAcidic (leucine-rich) nuclear phosphoprotein 32 family, member E. (256 aa)
W5MQE4_LEPOCTransformation/transcription domain-associated protein; Belongs to the PI3/PI4-kinase family. (3821 aa)
brms1lBRMS1 like transcriptional repressor b. (327 aa)
BAZ1ABromodomain adjacent to zinc finger domain 1A. (1505 aa)
LOC102698545Core histone macro-H2A; Variant histone H2A which replaces conventional H2A in a subset of nucleosomes. (377 aa)
W5MTP9_LEPOCBromodomain containing 8. (859 aa)
smarcal1SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a-like 1; Belongs to the SNF2/RAD54 helicase family. SMARCAL1 subfamily. (841 aa)
W5MU76_LEPOCSi:ch211-241j8.2. (465 aa)
orc2Origin recognition complex, subunit 2. (576 aa)
LOC102691803Core histone macro-H2A; Variant histone H2A which replaces conventional H2A in a subset of nucleosomes. (372 aa)
rad50RAD50 homolog, double strand break repair protein. (1312 aa)
W5MWS0_LEPOCMutL homolog 3 (E. coli). (1078 aa)
W5MXE6_LEPOCUncharacterized protein. (199 aa)
W5MY44_LEPOCINO80 complex subunit Db. (1052 aa)
W5MYF7_LEPOCRING-type domain-containing protein. (121 aa)
smchd1Structural maintenance of chromosomes flexible hinge domain containing 1. (2034 aa)
rpa3Replication protein A3. (121 aa)
ino80eINO80 complex subunit E. (242 aa)
W5MZK1_LEPOCMutS homolog 4. (840 aa)
W5N048_LEPOCUncharacterized protein. (1423 aa)
pole2DNA polymerase epsilon subunit; Participates in DNA repair and in chromosomal DNA replication; Belongs to the DNA polymerase epsilon subunit B family. (527 aa)
lrif1Uncharacterized protein. (904 aa)
LOC102683235Synaptonemal complex protein 3. (183 aa)
rad1RAD1 homolog (S. pombe). (281 aa)
dmc1Uncharacterized protein. (94 aa)
topbp1DNA topoisomerase II binding protein 1. (1514 aa)
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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