28 items (Lepisosteus oculatus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	W5LXJ3_LEPOC	DNA_pol_B domain-containing protein. (97 aa)
	poldip2	Polymerase (DNA-directed), delta interacting protein 2. (375 aa)
	W5LZL8_LEPOC	DNA repair protein REV1; Deoxycytidyl transferase involved in DNA repair. Transfers a dCMP residue from dCTP to the 3'-end of a DNA primer in a template- dependent reaction. May assist in the first step in the bypass of abasic lesions by the insertion of a nucleotide opposite the lesion. Required for normal induction of mutations by physical and chemical agents; Belongs to the DNA polymerase type-Y family. (1199 aa)
	pola1	DNA polymerase. (1486 aa)
	pold3	Polymerase (DNA-directed), delta 3, accessory subunit. (473 aa)
	poli	Polymerase (DNA directed) iota. (737 aa)
	spata22	Spermatogenesis associated 22. (441 aa)
	pole	DNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family. (2298 aa)
	W5MDZ8_LEPOC	Polymerase (DNA directed) kappa. (839 aa)
	vcp	Valosin containing protein; Belongs to the AAA ATPase family. (806 aa)
	cdkn2d	Cyclin-dependent kinase inhibitor 2D (p19, inhibits CDK4). (174 aa)
	parp10	Poly [ADP-ribose] polymerase. (1024 aa)
	LOC102686545	Zgc:136908; Belongs to the AAA ATPase family. (807 aa)
	W5MXE6_LEPOC	Uncharacterized protein. (199 aa)
	W5MXW8_LEPOC	WRN RecQ like helicase. (1464 aa)
	sirt1	Sirtuin 1. (720 aa)
	pole2	DNA polymerase epsilon subunit; Participates in DNA repair and in chromosomal DNA replication; Belongs to the DNA polymerase epsilon subunit B family. (527 aa)
	hrob	Uncharacterized protein. (685 aa)
	LOC102682241	ANK_REP_REGION domain-containing protein. (166 aa)
	wrnip1	WRN helicase interacting protein 1. (612 aa)
	primpol	Primase and polymerase (DNA-directed). (575 aa)
	pold2	Polymerase (DNA directed), delta 2, regulatory subunit. (469 aa)
	pcna	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. (264 aa)
	W5NFE6_LEPOC	Polymerase (DNA directed), eta. (645 aa)
	W5NFJ7_LEPOC	SprT-like N-terminal domain. (603 aa)
	dtl	Denticleless E3 ubiquitin protein ligase homolog (Drosophila). (667 aa)
	W5NK42_LEPOC	REV3 like, DNA directed polymerase zeta catalytic subunit. (3084 aa)
	zbtb1	Zinc finger and BTB domain containing 1. (697 aa)

Your Current Organism:

Lepisosteus oculatus

NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC102686545	W5MXW8_LEPOC	ENSLOCP00000012188	ENSLOCP00000013227	Zgc:136908; Belongs to the AAA ATPase family.	WRN RecQ like helicase.	0.435
LOC102686545	W5NFE6_LEPOC	ENSLOCP00000012188	ENSLOCP00000019355	Zgc:136908; Belongs to the AAA ATPase family.	Polymerase (DNA directed), eta.	0.611
LOC102686545	W5NFJ7_LEPOC	ENSLOCP00000012188	ENSLOCP00000019406	Zgc:136908; Belongs to the AAA ATPase family.	SprT-like N-terminal domain.	0.896
LOC102686545	hrob	ENSLOCP00000012188	ENSLOCP00000014789	Zgc:136908; Belongs to the AAA ATPase family.	Uncharacterized protein.	0.600
LOC102686545	pcna	ENSLOCP00000012188	ENSLOCP00000019251	Zgc:136908; Belongs to the AAA ATPase family.	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.	0.671
LOC102686545	poli	ENSLOCP00000012188	ENSLOCP00000004010	Zgc:136908; Belongs to the AAA ATPase family.	Polymerase (DNA directed) iota.	0.571
LOC102686545	vcp	ENSLOCP00000012188	ENSLOCP00000007960	Zgc:136908; Belongs to the AAA ATPase family.	Valosin containing protein; Belongs to the AAA ATPase family.	0.543
W5LXJ3_LEPOC	W5LZL8_LEPOC	ENSLOCP00000000850	ENSLOCP00000001575	DNA_pol_B domain-containing protein.	DNA repair protein REV1; Deoxycytidyl transferase involved in DNA repair. Transfers a dCMP residue from dCTP to the 3'-end of a DNA primer in a template- dependent reaction. May assist in the first step in the bypass of abasic lesions by the insertion of a nucleotide opposite the lesion. Required for normal induction of mutations by physical and chemical agents; Belongs to the DNA polymerase type-Y family.	0.890
W5LXJ3_LEPOC	W5MDZ8_LEPOC	ENSLOCP00000000850	ENSLOCP00000006607	DNA_pol_B domain-containing protein.	Polymerase (DNA directed) kappa.	0.890
W5LXJ3_LEPOC	W5MXW8_LEPOC	ENSLOCP00000000850	ENSLOCP00000013227	DNA_pol_B domain-containing protein.	WRN RecQ like helicase.	0.994
W5LXJ3_LEPOC	W5NFE6_LEPOC	ENSLOCP00000000850	ENSLOCP00000019355	DNA_pol_B domain-containing protein.	Polymerase (DNA directed), eta.	0.939
W5LXJ3_LEPOC	W5NFJ7_LEPOC	ENSLOCP00000000850	ENSLOCP00000019406	DNA_pol_B domain-containing protein.	SprT-like N-terminal domain.	0.536
W5LXJ3_LEPOC	W5NK42_LEPOC	ENSLOCP00000000850	ENSLOCP00000021001	DNA_pol_B domain-containing protein.	REV3 like, DNA directed polymerase zeta catalytic subunit.	0.937
W5LXJ3_LEPOC	dtl	ENSLOCP00000000850	ENSLOCP00000020200	DNA_pol_B domain-containing protein.	Denticleless E3 ubiquitin protein ligase homolog (Drosophila).	0.754
W5LXJ3_LEPOC	pcna	ENSLOCP00000000850	ENSLOCP00000019251	DNA_pol_B domain-containing protein.	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.	0.998
W5LXJ3_LEPOC	pola1	ENSLOCP00000000850	ENSLOCP00000002197	DNA_pol_B domain-containing protein.	DNA polymerase.	0.985
W5LXJ3_LEPOC	pold2	ENSLOCP00000000850	ENSLOCP00000018670	DNA_pol_B domain-containing protein.	Polymerase (DNA directed), delta 2, regulatory subunit.	0.999
W5LXJ3_LEPOC	pold3	ENSLOCP00000000850	ENSLOCP00000002686	DNA_pol_B domain-containing protein.	Polymerase (DNA-directed), delta 3, accessory subunit.	0.997
W5LXJ3_LEPOC	pole	ENSLOCP00000000850	ENSLOCP00000004785	DNA_pol_B domain-containing protein.	DNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family.	0.994
W5LXJ3_LEPOC	pole2	ENSLOCP00000000850	ENSLOCP00000014050	DNA_pol_B domain-containing protein.	DNA polymerase epsilon subunit; Participates in DNA repair and in chromosomal DNA replication; Belongs to the DNA polymerase epsilon subunit B family.	0.989