36 items (Lepisosteus oculatus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	W5LW37_LEPOC	Ras-GAP domain-containing protein. (183 aa)
	poldip2	Polymerase (DNA-directed), delta interacting protein 2. (375 aa)
	nrp1	Neuropilin; Belongs to the neuropilin family. (924 aa)
	W5LYH6_LEPOC	Protein tyrosine phosphatase receptor type A. (775 aa)
	rasa1	RAS p21 protein activator (GTPase activating protein) 1b. (1035 aa)
	cask	Calcium/calmodulin-dependent serine protein kinase a; Belongs to the MAGUK family. (929 aa)
	W5MAE7_LEPOC	Vinculin a. (1122 aa)
	W5MAG4_LEPOC	Uncharacterized protein. (171 aa)
	LOC107079250	Fibronectin type-III domain-containing protein. (660 aa)
	LOC102697924	Uncharacterized protein. (418 aa)
	W5MBC0_LEPOC	Neurofibromin 1b. (2820 aa)
	bcas3	BCAS3 microtubule associated cell migration factor. (814 aa)
	LOC102697582	TSC complex subunit 1a. (1189 aa)
	W5MFW2_LEPOC	Adherens junctions associated protein 1. (423 aa)
	LOC102688062	Eph receptor A4b. (976 aa)
	LOC102692231	Apolipoprotein Da, duplicate 1; Belongs to the calycin superfamily. Lipocalin family. (189 aa)
	LOC102692434	Apolipoprotein Da, duplicate 2; Belongs to the calycin superfamily. Lipocalin family. (197 aa)
	LOC102684964	Protein S100; Belongs to the S-100 family. (125 aa)
	W5MLW0_LEPOC	Protein tyrosine kinase 2aa. (1079 aa)
	tsta3	Tissue specific transplantation antigen P35B. (330 aa)
	EFNA5	Ephrin A5; Belongs to the ephrin family. (229 aa)
	acer2	Alkaline ceramidase; Hydrolyzes the sphingolipid ceramide into sphingosine and free fatty acid. (277 aa)
	W5N2I6_LEPOC	Colony stimulating factor 1b (macrophage). (250 aa)
	W5N5K7_LEPOC	LIM and calponin homology domains 1b. (1002 aa)
	W5N7E7_LEPOC	Src kinase associated phosphoprotein 1. (285 aa)
	W5N862_LEPOC	Neurite extension and migration factor b. (1279 aa)
	LOC102695806	Junction plakoglobin b. (738 aa)
	serpine1	Serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1; Belongs to the serpin family. (391 aa)
	cib1	Calcium and integrin binding 1 (calmyrin). (189 aa)
	disc1	DISC1 scaffold protein. (649 aa)
	vegfa	Vascular endothelial growth factor Ab; Belongs to the PDGF/VEGF growth factor family. (253 aa)
	wdpcp	WD repeat containing planar cell polarity effector. (616 aa)
	rin2	Si:ch211-85n16.4. (894 aa)
	fermt1	Fermitin family member 1. (677 aa)
	W5NJI3_LEPOC	Integrin beta 1 binding protein 1. (201 aa)
	ptk2b	Protein tyrosine kinase 2 beta, b; Belongs to the protein kinase superfamily. Tyr protein kinase family. (1004 aa)

Your Current Organism:

Lepisosteus oculatus

NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
EFNA5	LOC102688062	ENSLOCP00000011160	ENSLOCP00000008275	Ephrin A5; Belongs to the ephrin family.	Eph receptor A4b.	0.746
EFNA5	rasa1	ENSLOCP00000011160	ENSLOCP00000002242	Ephrin A5; Belongs to the ephrin family.	RAS p21 protein activator (GTPase activating protein) 1b.	0.883
LOC102688062	EFNA5	ENSLOCP00000008275	ENSLOCP00000011160	Eph receptor A4b.	Ephrin A5; Belongs to the ephrin family.	0.746
LOC102688062	W5MLW0_LEPOC	ENSLOCP00000008275	ENSLOCP00000009369	Eph receptor A4b.	Protein tyrosine kinase 2aa.	0.452
LOC102688062	W5N2I6_LEPOC	ENSLOCP00000008275	ENSLOCP00000014845	Eph receptor A4b.	Colony stimulating factor 1b (macrophage).	0.491
LOC102688062	cask	ENSLOCP00000008275	ENSLOCP00000002407	Eph receptor A4b.	Calcium/calmodulin-dependent serine protein kinase a; Belongs to the MAGUK family.	0.550
LOC102688062	ptk2b	ENSLOCP00000008275	ENSLOCP00000021325	Eph receptor A4b.	Protein tyrosine kinase 2 beta, b; Belongs to the protein kinase superfamily. Tyr protein kinase family.	0.452
LOC102688062	rasa1	ENSLOCP00000008275	ENSLOCP00000002242	Eph receptor A4b.	RAS p21 protein activator (GTPase activating protein) 1b.	0.575
LOC102695806	LOC102697924	ENSLOCP00000016854	ENSLOCP00000005625	Junction plakoglobin b.	Uncharacterized protein.	0.557
LOC102695806	LOC107079250	ENSLOCP00000016854	ENSLOCP00000005610	Junction plakoglobin b.	Fibronectin type-III domain-containing protein.	0.557
LOC102695806	W5LYH6_LEPOC	ENSLOCP00000016854	ENSLOCP00000001183	Junction plakoglobin b.	Protein tyrosine phosphatase receptor type A.	0.557
LOC102695806	W5MAE7_LEPOC	ENSLOCP00000016854	ENSLOCP00000005356	Junction plakoglobin b.	Vinculin a.	0.752
LOC102695806	W5MAG4_LEPOC	ENSLOCP00000016854	ENSLOCP00000005373	Junction plakoglobin b.	Uncharacterized protein.	0.752
LOC102697582	W5MLW0_LEPOC	ENSLOCP00000006922	ENSLOCP00000009369	TSC complex subunit 1a.	Protein tyrosine kinase 2aa.	0.432
LOC102697582	ptk2b	ENSLOCP00000006922	ENSLOCP00000021325	TSC complex subunit 1a.	Protein tyrosine kinase 2 beta, b; Belongs to the protein kinase superfamily. Tyr protein kinase family.	0.432
LOC102697582	rasa1	ENSLOCP00000006922	ENSLOCP00000002242	TSC complex subunit 1a.	RAS p21 protein activator (GTPase activating protein) 1b.	0.579
LOC102697924	LOC102695806	ENSLOCP00000005625	ENSLOCP00000016854	Uncharacterized protein.	Junction plakoglobin b.	0.557
LOC102697924	W5MLW0_LEPOC	ENSLOCP00000005625	ENSLOCP00000009369	Uncharacterized protein.	Protein tyrosine kinase 2aa.	0.524
LOC102697924	ptk2b	ENSLOCP00000005625	ENSLOCP00000021325	Uncharacterized protein.	Protein tyrosine kinase 2 beta, b; Belongs to the protein kinase superfamily. Tyr protein kinase family.	0.524
LOC107079250	LOC102695806	ENSLOCP00000005610	ENSLOCP00000016854	Fibronectin type-III domain-containing protein.	Junction plakoglobin b.	0.557