(6 nodes) Nucleolar ribonuclease P complex network (Lepisosteus oculatus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	rpp21	Ribonuclease P 21 subunit. (159 aa)
	rpp30	Ribonuclease P/MRP 30 subunit. (266 aa)
	pop5	Ribonuclease P/MRP protein subunit POP5; Component of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5'-ends. (168 aa)
	POP1	POP1 homolog, ribonuclease P/MRP subunit. (1009 aa)
	pop7	Ribonuclease P protein subunit p20; Component of ribonuclease P, a ribonucleoprotein complex that generates mature tRNA molecules by cleaving their 5'-ends. Also a component of the MRP ribonuclease complex, which cleaves pre-rRNA sequences. (149 aa)
	W5NP89_LEPOC	Ribonuclease P/MRP 38 subunit. (284 aa)

Your Current Organism:

Lepisosteus oculatus

NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
POP1	W5NP89_LEPOC	ENSLOCP00000012006	ENSLOCP00000022448	POP1 homolog, ribonuclease P/MRP subunit.	Ribonuclease P/MRP 38 subunit.	0.989
POP1	pop5	ENSLOCP00000012006	ENSLOCP00000003437	POP1 homolog, ribonuclease P/MRP subunit.	Ribonuclease P/MRP protein subunit POP5; Component of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5'-ends.	0.999
POP1	pop7	ENSLOCP00000012006	ENSLOCP00000021658	POP1 homolog, ribonuclease P/MRP subunit.	Ribonuclease P protein subunit p20; Component of ribonuclease P, a ribonucleoprotein complex that generates mature tRNA molecules by cleaving their 5'-ends. Also a component of the MRP ribonuclease complex, which cleaves pre-rRNA sequences.	0.953
POP1	rpp21	ENSLOCP00000012006	ENSLOCP00000006755	POP1 homolog, ribonuclease P/MRP subunit.	Ribonuclease P 21 subunit.	0.998
POP1	rpp30	ENSLOCP00000012006	ENSLOCP00000000038	POP1 homolog, ribonuclease P/MRP subunit.	Ribonuclease P/MRP 30 subunit.	0.999
W5NP89_LEPOC	POP1	ENSLOCP00000022448	ENSLOCP00000012006	Ribonuclease P/MRP 38 subunit.	POP1 homolog, ribonuclease P/MRP subunit.	0.989
W5NP89_LEPOC	pop5	ENSLOCP00000022448	ENSLOCP00000003437	Ribonuclease P/MRP 38 subunit.	Ribonuclease P/MRP protein subunit POP5; Component of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5'-ends.	0.997
W5NP89_LEPOC	pop7	ENSLOCP00000022448	ENSLOCP00000021658	Ribonuclease P/MRP 38 subunit.	Ribonuclease P protein subunit p20; Component of ribonuclease P, a ribonucleoprotein complex that generates mature tRNA molecules by cleaving their 5'-ends. Also a component of the MRP ribonuclease complex, which cleaves pre-rRNA sequences.	0.925
W5NP89_LEPOC	rpp21	ENSLOCP00000022448	ENSLOCP00000006755	Ribonuclease P/MRP 38 subunit.	Ribonuclease P 21 subunit.	0.995
W5NP89_LEPOC	rpp30	ENSLOCP00000022448	ENSLOCP00000000038	Ribonuclease P/MRP 38 subunit.	Ribonuclease P/MRP 30 subunit.	0.997
pop5	POP1	ENSLOCP00000003437	ENSLOCP00000012006	Ribonuclease P/MRP protein subunit POP5; Component of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5'-ends.	POP1 homolog, ribonuclease P/MRP subunit.	0.999
pop5	W5NP89_LEPOC	ENSLOCP00000003437	ENSLOCP00000022448	Ribonuclease P/MRP protein subunit POP5; Component of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5'-ends.	Ribonuclease P/MRP 38 subunit.	0.997
pop5	pop7	ENSLOCP00000003437	ENSLOCP00000021658	Ribonuclease P/MRP protein subunit POP5; Component of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5'-ends.	Ribonuclease P protein subunit p20; Component of ribonuclease P, a ribonucleoprotein complex that generates mature tRNA molecules by cleaving their 5'-ends. Also a component of the MRP ribonuclease complex, which cleaves pre-rRNA sequences.	0.979
pop5	rpp21	ENSLOCP00000003437	ENSLOCP00000006755	Ribonuclease P/MRP protein subunit POP5; Component of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5'-ends.	Ribonuclease P 21 subunit.	0.999
pop5	rpp30	ENSLOCP00000003437	ENSLOCP00000000038	Ribonuclease P/MRP protein subunit POP5; Component of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5'-ends.	Ribonuclease P/MRP 30 subunit.	0.999
pop7	POP1	ENSLOCP00000021658	ENSLOCP00000012006	Ribonuclease P protein subunit p20; Component of ribonuclease P, a ribonucleoprotein complex that generates mature tRNA molecules by cleaving their 5'-ends. Also a component of the MRP ribonuclease complex, which cleaves pre-rRNA sequences.	POP1 homolog, ribonuclease P/MRP subunit.	0.953
pop7	W5NP89_LEPOC	ENSLOCP00000021658	ENSLOCP00000022448	Ribonuclease P protein subunit p20; Component of ribonuclease P, a ribonucleoprotein complex that generates mature tRNA molecules by cleaving their 5'-ends. Also a component of the MRP ribonuclease complex, which cleaves pre-rRNA sequences.	Ribonuclease P/MRP 38 subunit.	0.925
pop7	pop5	ENSLOCP00000021658	ENSLOCP00000003437	Ribonuclease P protein subunit p20; Component of ribonuclease P, a ribonucleoprotein complex that generates mature tRNA molecules by cleaving their 5'-ends. Also a component of the MRP ribonuclease complex, which cleaves pre-rRNA sequences.	Ribonuclease P/MRP protein subunit POP5; Component of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5'-ends.	0.979
pop7	rpp21	ENSLOCP00000021658	ENSLOCP00000006755	Ribonuclease P protein subunit p20; Component of ribonuclease P, a ribonucleoprotein complex that generates mature tRNA molecules by cleaving their 5'-ends. Also a component of the MRP ribonuclease complex, which cleaves pre-rRNA sequences.	Ribonuclease P 21 subunit.	0.954
pop7	rpp30	ENSLOCP00000021658	ENSLOCP00000000038	Ribonuclease P protein subunit p20; Component of ribonuclease P, a ribonucleoprotein complex that generates mature tRNA molecules by cleaving their 5'-ends. Also a component of the MRP ribonuclease complex, which cleaves pre-rRNA sequences.	Ribonuclease P/MRP 30 subunit.	0.958