STRINGSTRING
rad51 rad51 wrnip1 wrnip1 mcm7 mcm7 LOC102695737 LOC102695737 exd2 exd2 W5N7S3_LEPOC W5N7S3_LEPOC cdc6 cdc6 mcm2 mcm2 atrx atrx primpol primpol W5N8N6_LEPOC W5N8N6_LEPOC W5N8X8_LEPOC W5N8X8_LEPOC blm blm polg polg W5LXJ3_LEPOC W5LXJ3_LEPOC mcm6 mcm6 rfc4 rfc4 rfc2 rfc2 gins2 gins2 orc4 orc4 rfwd3 rfwd3 W5M0N9_LEPOC W5M0N9_LEPOC W5M103_LEPOC W5M103_LEPOC cdc45 cdc45 W5M196_LEPOC W5M196_LEPOC pola1 pola1 GEN1 GEN1 mms22l mms22l prim2 prim2 W5NJX2_LEPOC W5NJX2_LEPOC gins1 gins1 helb helb gins4 gins4 W5NG96_LEPOC W5NG96_LEPOC mcm10 mcm10 mgme1 mgme1 W5NF63_LEPOC W5NF63_LEPOC W5NEJ3_LEPOC W5NEJ3_LEPOC W5NE81_LEPOC W5NE81_LEPOC pold2 pold2 lig3 lig3 thoc1 thoc1 W5M2K0_LEPOC W5M2K0_LEPOC EME2 EME2 pold3 pold3 pole3 pole3 W5M4G9_LEPOC W5M4G9_LEPOC W5M4I8_LEPOC W5M4I8_LEPOC rpain rpain rfc5 rfc5 gins3 gins3 pole4 pole4 pole pole timeless timeless W5MA42_LEPOC W5MA42_LEPOC W5MA78_LEPOC W5MA78_LEPOC gmnn gmnn W5MBI2_LEPOC W5MBI2_LEPOC ZNF830 ZNF830 orc6 orc6 zpr1 zpr1 W5MET7_LEPOC W5MET7_LEPOC tonsl tonsl noc3l noc3l mcm4 mcm4 orc1 orc1 ccne2 ccne2 rpa1 rpa1 prim1 prim1 ddx23 ddx23 recql4 recql4 mre11 mre11 atr atr W5MNK3_LEPOC W5MNK3_LEPOC rfc3 rfc3 W5MPK4_LEPOC W5MPK4_LEPOC ddx21 ddx21 DNA2 DNA2 gmnc gmnc BAZ1A BAZ1A smarcal1 smarcal1 W5MXW8_LEPOC W5MXW8_LEPOC traip traip DONSON DONSON LOC102698683 LOC102698683 eme1 eme1 FANCM FANCM pole2 pole2 W5N0A7_LEPOC W5N0A7_LEPOC recql5 recql5 topbp1 topbp1 W5N2L8_LEPOC W5N2L8_LEPOC LOC102697986 LOC102697986 sirt7 sirt7 W5N4H5_LEPOC W5N4H5_LEPOC twnk twnk
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
rad51DNA repair protein RAD51 homolog; Plays an important role in homologous strand exchange, a key step in DNA repair through homologous recombination. Binds to single and double-stranded DNA and exhibits DNA-dependent ATPase activity. Catalyzes the recognition of homology and strand exchange between homologous DNA partners to form a joint molecule between a processed DNA break and the repair template. Binds to single-stranded DNA in an ATP-dependent manner to form nucleoprotein filaments which are essential for the homology search and strand exchange. Belongs to the RecA family. RAD51 sub [...] (341 aa)
wrnip1WRN helicase interacting protein 1. (612 aa)
mcm7DNA replication licensing factor MCM7; Acts as component of the mcm2-7 complex (mcm complex) which is the putative replicative helicase essential for 'once per cell cycle' DNA replication initiation and elongation in eukaryotic cells. The active ATPase sites in the mcm2-7 ring are formed through the interaction surfaces of two neighboring subunits such that a critical structure of a conserved arginine finger motif is provided in trans relative to the ATP-binding site of the Walker A box of the adjacent subunit. The six ATPase active sites, however, are likely to contribute differential [...] (721 aa)
LOC102695737DNA helicase; Belongs to the MCM family. (834 aa)
exd2Exonuclease 3'-5' domain containing 2. (613 aa)
W5N7S3_LEPOCPolymerase (DNA directed), gamma 2, accessory subunit. (415 aa)
cdc6Cell division control protein; Involved in the initiation of DNA replication. Also participates in checkpoint controls that ensure DNA replication is completed before mitosis is initiated; Belongs to the CDC6/cdc18 family. (558 aa)
mcm2DNA helicase; Belongs to the MCM family. (887 aa)
atrxATRX chromatin remodeler, like. (2427 aa)
primpolPrimase and polymerase (DNA-directed). (575 aa)
W5N8N6_LEPOCATPase family AAA domain containing 5a. (1812 aa)
W5N8X8_LEPOCTIMELESS-interacting protein; Plays an important role in the control of DNA replication and the maintenance of replication fork stability. Belongs to the CSM3 family. (323 aa)
blmBLM RecQ like helicase. (1481 aa)
polgPolymerase (DNA directed), gamma. (1200 aa)
W5LXJ3_LEPOCDNA_pol_B domain-containing protein. (97 aa)
mcm6DNA helicase; Belongs to the MCM family. (819 aa)
rfc4Replication factor C (activator 1) 4. (359 aa)
rfc2Replication factor C (activator 1) 2. (358 aa)
gins2DNA replication complex GINS protein PSF2; Belongs to the GINS2/PSF2 family. (186 aa)
orc4Origin recognition complex subunit 4; Component of the origin recognition complex (ORC) that binds origins of replication; Belongs to the ORC4 family. (434 aa)
rfwd3Ring finger and WD repeat domain 3. (727 aa)
W5M0N9_LEPOCZinc finger, RAN-binding domain containing 3. (1142 aa)
W5M103_LEPOCDNA ligase. (1030 aa)
cdc45CDC45 cell division cycle 45 homolog (S. cerevisiae). (570 aa)
W5M196_LEPOCWD repeat domain 18. (433 aa)
pola1DNA polymerase. (1486 aa)
GEN1GEN1 Holliday junction 5' flap endonuclease. (461 aa)
mms22lMMS22-like, DNA repair protein. (1238 aa)
prim2DNA primase large subunit; Regulatory subunit of the DNA primase complex and component of the DNA polymerase alpha complex (also known as the alpha DNA polymerase-primase complex) which play an essential role in the initiation of DNA synthesis. The primase subunit of the polymerase alpha complex initiates DNA synthesis by oligomerising short RNA primers on both leading and lagging strands. (512 aa)
W5NJX2_LEPOCOrigin recognition complex, subunit 3. (728 aa)
gins1GINS complex subunit 1 (Psf1 homolog). (196 aa)
helbHelicase (DNA) B. (1126 aa)
gins4DNA replication complex GINS protein SLD5; The GINS complex plays an essential role in the initiation of DNA replication; Belongs to the GINS4/SLD5 family. (225 aa)
W5NG96_LEPOCDNA helicase; Belongs to the MCM family. (815 aa)
mcm10Minichromosome maintenance 10 replication initiation factor. (867 aa)
mgme1Mitochondrial genome maintenance exonuclease 1; Metal-dependent single-stranded DNA (ssDNA) exonuclease involved in mitochondrial genome maintenance. Has preference for 5'-3' exonuclease activity. Necessary for maintenance of proper 7S DNA levels. Probably involved in mitochondrial DNA (mtDNA) repair. Belongs to the MGME1 family. (344 aa)
W5NF63_LEPOCF-box DNA helicase 1. (1007 aa)
W5NEJ3_LEPOCOrigin recognition complex, subunit 5. (375 aa)
W5NE81_LEPOCATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily. (636 aa)
pold2Polymerase (DNA directed), delta 2, regulatory subunit. (469 aa)
lig3DNA ligase. (1001 aa)
thoc1THO complex 1. (656 aa)
W5M2K0_LEPOCPolymerase (DNA directed) nu. (728 aa)
EME2Essential meiotic structure-specific endonuclease subunit 2. (472 aa)
pold3Polymerase (DNA-directed), delta 3, accessory subunit. (473 aa)
pole3Polymerase (DNA directed), epsilon 3 (p17 subunit). (148 aa)
W5M4G9_LEPOCDNA_pol_E_B domain-containing protein. (66 aa)
W5M4I8_LEPOCUncharacterized protein. (168 aa)
rpainRPA interacting protein. (227 aa)
rfc5Replication factor C (activator 1) 5. (367 aa)
gins3GINS complex subunit 3. (211 aa)
pole4Polymerase (DNA-directed), epsilon 4, accessory subunit; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (135 aa)
poleDNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family. (2298 aa)
timelessTimeless circadian clock. (1225 aa)
W5MA42_LEPOCSAM domain and HD domain 1. (617 aa)
W5MA78_LEPOCHD domain-containing protein. (411 aa)
gmnnGeminin DNA replication inhibitor. (223 aa)
W5MBI2_LEPOCChromatin licensing and DNA replication factor 1. (614 aa)
ZNF830Zinc finger protein 830. (352 aa)
orc6Origin recognition complex, subunit 6. (256 aa)
zpr1ZPR1 zinc finger. (447 aa)
W5MET7_LEPOCPolymerase (DNA directed), theta. (2592 aa)
tonslTonsoku-like, DNA repair protein. (1444 aa)
noc3lNucleolar complex protein 3 homolog. (805 aa)
mcm4DNA helicase; Belongs to the MCM family. (678 aa)
orc1Origin recognition complex subunit 1; Component of the origin recognition complex (ORC) that binds origins of replication. DNA-binding is ATP-dependent, however specific DNA sequences that define origins of replication have not been identified so far. ORC is required to assemble the pre-replication complex necessary to initiate DNA replication. (919 aa)
ccne2Cyclin E2; Belongs to the cyclin family. (395 aa)
rpa1Replication protein A subunit; As part of the heterotrimeric replication protein A complex (RPA/RP-A), binds and stabilizes single-stranded DNA intermediates, that form during DNA replication or upon DNA stress. It prevents their reannealing and in parallel, recruits and activates different proteins and complexes involved in DNA metabolism. Thereby, it plays an essential role both in DNA replication and the cellular response to DNA damage. (607 aa)
prim1DNA primase; Belongs to the eukaryotic-type primase small subunit family. (426 aa)
ddx23DEAD (Asp-Glu-Ala-Asp) box polypeptide 23. (818 aa)
recql4RecQ helicase-like 4. (1459 aa)
mre11Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing. (725 aa)
atrATR serine/threonine kinase; Belongs to the PI3/PI4-kinase family. (2649 aa)
W5MNK3_LEPOCTower domain-containing protein. (871 aa)
rfc3Replication factor C (activator 1) 3. (356 aa)
W5MPK4_LEPOCTIMELESS-interacting protein; Plays an important role in the control of DNA replication and the maintenance of replication fork stability. Belongs to the CSM3 family. (151 aa)
ddx21DEAD (Asp-Glu-Ala-Asp) box helicase 21. (777 aa)
DNA2DNA replication helicase/nuclease 2. (1397 aa)
gmncGeminin coiled-coil domain containing. (346 aa)
BAZ1ABromodomain adjacent to zinc finger domain 1A. (1505 aa)
smarcal1SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a-like 1; Belongs to the SNF2/RAD54 helicase family. SMARCAL1 subfamily. (841 aa)
W5MXW8_LEPOCWRN RecQ like helicase. (1464 aa)
traipTRAF-interacting protein. (458 aa)
DONSONDownstream neighbor of SON. (619 aa)
LOC102698683SET domain and mariner transposase fusion gene. (296 aa)
eme1Essential meiotic structure-specific endonuclease 1. (590 aa)
FANCMFA complementation group M. (2093 aa)
pole2DNA polymerase epsilon subunit; Participates in DNA repair and in chromosomal DNA replication; Belongs to the DNA polymerase epsilon subunit B family. (527 aa)
W5N0A7_LEPOCMinichromosome maintenance complex binding protein. (638 aa)
recql5RecQ helicase-like 5. (1025 aa)
topbp1DNA topoisomerase II binding protein 1. (1514 aa)
W5N2L8_LEPOCWD repeat and HMG-box DNA binding protein 1. (1133 aa)
LOC102697986DNA helicase; Belongs to the MCM family. (814 aa)
sirt7Sirtuin 7. (437 aa)
W5N4H5_LEPOCUncharacterized protein. (49 aa)
twnkTwinkle mtDNA helicase. (699 aa)
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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