33 items (Lepisosteus oculatus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC102682992	Si:ch1073-416j23.1. (648 aa)
	cdc42	Cell division cycle 42. (195 aa)
	W5M1U6_LEPOC	Rho-associated, coiled-coil containing protein kinase 1; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. (1322 aa)
	W5M6Q1_LEPOC	Tax1 (human T-cell leukemia virus type I) binding protein 3. (126 aa)
	W5M7I4_LEPOC	Phosphatase and actin regulator. (995 aa)
	gna12	Guanine nucleotide binding protein (G protein) alpha 12a. (384 aa)
	racgap1	Rac GTPase activating protein 1. (654 aa)
	cnksr1	Connector enhancer of kinase suppressor of Ras 1. (836 aa)
	LOC102692225	Neurotrophin receptor associated death domain. (409 aa)
	arhgdig	Rho GDP dissociation inhibitor (GDI) gamma. (224 aa)
	ctnnal1	Catenin (cadherin-associated protein), alpha-like 1. (754 aa)
	LOC102698253	Cell division cycle 42, like. (191 aa)
	arhgap5	Rho GTPase activating protein 5. (1508 aa)
	W5MTN7_LEPOC	Shootin 1. (484 aa)
	W5MZM8_LEPOC	EPS8-like 3b. (658 aa)
	ngfr	Nerve growth factor receptor b. (427 aa)
	rhov	Ras homolog family member V. (244 aa)
	gna13	Guanine nucleotide binding protein (G protein), alpha 13b. (377 aa)
	phactr1	Phosphatase and actin regulator. (615 aa)
	itga3	Integrin, alpha 3a; Belongs to the integrin alpha chain family. (1074 aa)
	arhgdia	Rho GDP dissociation inhibitor (GDI) alpha. (234 aa)
	W5NCH2_LEPOC	Ras homolog family member Ub. (304 aa)
	arhgap35	Rho GTPase activating protein 35b. (1538 aa)
	W5NDV9_LEPOC	Pleckstrin homology domain containing, family G (with RhoGef domain) member 7. (631 aa)
	rhou	Ras homolog family member Ua. (253 aa)
	eps8	Epidermal growth factor receptor pathway substrate 8a. (851 aa)
	W5NIL0_LEPOC	CDC42 effector protein (Rho GTPase binding) 3. (239 aa)
	W5NIY2_LEPOC	Rho-associated, coiled-coil containing protein kinase 2b; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. (1449 aa)
	agtr1	Angiotensin II receptor, type 1b; Belongs to the G-protein coupled receptor 1 family. (351 aa)
	LOC102690743	Ras homolog gene family, member Gc. (191 aa)
	LOC102689374	Zgc:154093. (252 aa)
	cdc42ep4	CDC42 effector protein (Rho GTPase binding) 4a. (331 aa)
	rhog	Ras homolog family member Gb. (191 aa)

Your Current Organism:

Lepisosteus oculatus

NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC102682992	LOC102690743	ENSLOCP00000000809	ENSLOCP00000021588	Si:ch1073-416j23.1.	Ras homolog gene family, member Gc.	0.561
LOC102682992	LOC102698253	ENSLOCP00000000809	ENSLOCP00000008990	Si:ch1073-416j23.1.	Cell division cycle 42, like.	0.827
LOC102682992	W5NCH2_LEPOC	ENSLOCP00000000809	ENSLOCP00000018331	Si:ch1073-416j23.1.	Ras homolog family member Ub.	0.561
LOC102682992	cdc42	ENSLOCP00000000809	ENSLOCP00000001212	Si:ch1073-416j23.1.	Cell division cycle 42.	0.912
LOC102682992	racgap1	ENSLOCP00000000809	ENSLOCP00000005658	Si:ch1073-416j23.1.	Rac GTPase activating protein 1.	0.556
LOC102682992	rhog	ENSLOCP00000000809	ENSLOCP00000022124	Si:ch1073-416j23.1.	Ras homolog family member Gb.	0.561
LOC102682992	rhou	ENSLOCP00000000809	ENSLOCP00000019047	Si:ch1073-416j23.1.	Ras homolog family member Ua.	0.561
LOC102682992	rhov	ENSLOCP00000000809	ENSLOCP00000015172	Si:ch1073-416j23.1.	Ras homolog family member V.	0.561
LOC102689374	cdc42ep4	ENSLOCP00000021669	ENSLOCP00000021863	Zgc:154093.	CDC42 effector protein (Rho GTPase binding) 4a.	0.566
LOC102690743	LOC102682992	ENSLOCP00000021588	ENSLOCP00000000809	Ras homolog gene family, member Gc.	Si:ch1073-416j23.1.	0.561
LOC102690743	LOC102698253	ENSLOCP00000021588	ENSLOCP00000008990	Ras homolog gene family, member Gc.	Cell division cycle 42, like.	0.599
LOC102690743	W5M1U6_LEPOC	ENSLOCP00000021588	ENSLOCP00000002354	Ras homolog gene family, member Gc.	Rho-associated, coiled-coil containing protein kinase 1; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family.	0.535
LOC102690743	W5NDV9_LEPOC	ENSLOCP00000021588	ENSLOCP00000018818	Ras homolog gene family, member Gc.	Pleckstrin homology domain containing, family G (with RhoGef domain) member 7.	0.428
LOC102690743	W5NIL0_LEPOC	ENSLOCP00000021588	ENSLOCP00000020469	Ras homolog gene family, member Gc.	CDC42 effector protein (Rho GTPase binding) 3.	0.495
LOC102690743	W5NIY2_LEPOC	ENSLOCP00000021588	ENSLOCP00000020591	Ras homolog gene family, member Gc.	Rho-associated, coiled-coil containing protein kinase 2b; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family.	0.535
LOC102690743	arhgap35	ENSLOCP00000021588	ENSLOCP00000018340	Ras homolog gene family, member Gc.	Rho GTPase activating protein 35b.	0.583
LOC102690743	arhgap5	ENSLOCP00000021588	ENSLOCP00000011663	Ras homolog gene family, member Gc.	Rho GTPase activating protein 5.	0.583
LOC102690743	arhgdia	ENSLOCP00000021588	ENSLOCP00000017121	Ras homolog gene family, member Gc.	Rho GDP dissociation inhibitor (GDI) alpha.	0.847
LOC102690743	arhgdig	ENSLOCP00000021588	ENSLOCP00000007646	Ras homolog gene family, member Gc.	Rho GDP dissociation inhibitor (GDI) gamma.	0.847
LOC102690743	cdc42	ENSLOCP00000021588	ENSLOCP00000001212	Ras homolog gene family, member Gc.	Cell division cycle 42.	0.642