STRINGSTRING
ctdnep1 ctdnep1 slc27a1 slc27a1 W5MKX1_LEPOC W5MKX1_LEPOC W5MH03_LEPOC W5MH03_LEPOC scarb1 scarb1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ctdnep1CTD nuclear envelope phosphatase 1b. (373 aa)
slc27a1Solute carrier family 27 member 1a. (647 aa)
W5MKX1_LEPOCCTD nuclear envelope phosphatase 1 regulatory subunit 1. (118 aa)
W5MH03_LEPOCNuclear receptor subfamily 1, group H, member 3. (280 aa)
scarb1Scavenger receptor class B, member 1; Belongs to the CD36 family. (532 aa)
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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