STRINGSTRING
mst1r mst1r plxnc1 plxnc1 plxna4 plxna4 met met plxnb2 plxnb2 W5NBQ4_LEPOC W5NBQ4_LEPOC PLXNA3 PLXNA3 plxna1 plxna1 W5N857_LEPOC W5N857_LEPOC PLXND1 PLXND1 W5MYV5_LEPOC W5MYV5_LEPOC plxna2 plxna2 nrp1 nrp1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
mst1rMacrophage stimulating 1 receptor b. (1360 aa)
plxnc1Plexin C1. (1509 aa)
plxna4Plexin A4. (1893 aa)
metMET proto-oncogene, receptor tyrosine kinase. (1382 aa)
plxnb2Plexin b2b. (1861 aa)
W5NBQ4_LEPOCPlexin B3. (1754 aa)
PLXNA3Plexin A3. (1899 aa)
plxna1Plexin A1a. (1948 aa)
W5N857_LEPOCPlexin b1a. (2194 aa)
PLXND1Plexin D1. (1899 aa)
W5MYV5_LEPOCNeuropilin; Belongs to the neuropilin family. (912 aa)
plxna2Plexin A2. (1901 aa)
nrp1Neuropilin; Belongs to the neuropilin family. (924 aa)
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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