STRINGSTRING
W5NP89_LEPOC W5NP89_LEPOC rpp30 rpp30 pop5 pop5 rpp21 rpp21 pop4 pop4 prorp prorp POP1 POP1 rpp40 rpp40 rpp14 rpp14 W5NDC9_LEPOC W5NDC9_LEPOC pop7 pop7 trmt10c trmt10c
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
W5NP89_LEPOCRibonuclease P/MRP 38 subunit. (284 aa)
rpp30Ribonuclease P/MRP 30 subunit. (266 aa)
pop5Ribonuclease P/MRP protein subunit POP5; Component of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5'-ends. (168 aa)
rpp21Ribonuclease P 21 subunit. (159 aa)
pop4Ribonuclease P protein subunit p29; Component of ribonuclease P, a ribonucleoprotein complex that generates mature tRNA molecules by cleaving their 5'-ends. (220 aa)
prorpProtein only RNase P catalytic subunit. (500 aa)
POP1POP1 homolog, ribonuclease P/MRP subunit. (1009 aa)
rpp40Ribonuclease P/MRP 40 subunit. (363 aa)
rpp14Ribonuclease P/MRP protein subunit POP5; Component of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5'-ends. (120 aa)
W5NDC9_LEPOCRibonuclease P and MRP subunit p25, b. (166 aa)
pop7Ribonuclease P protein subunit p20; Component of ribonuclease P, a ribonucleoprotein complex that generates mature tRNA molecules by cleaving their 5'-ends. Also a component of the MRP ribonuclease complex, which cleaves pre-rRNA sequences. (149 aa)
trmt10ctRNA methyltransferase 10C, mitochondrial RNase P subunit. (445 aa)
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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