44 items (Lepisosteus oculatus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC102682992	Si:ch1073-416j23.1. (648 aa)
	W5LZV2_LEPOC	Si:dkey-6b12.5. (541 aa)
	EPB41L1	Erythrocyte membrane protein band 4.1 like 1. (877 aa)
	rnd3	Rho family GTPase 3b. (243 aa)
	W5M1U6_LEPOC	Rho-associated, coiled-coil containing protein kinase 1; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. (1322 aa)
	W5M5I3_LEPOC	Erythrocyte membrane protein band 4.1-like 3a. (883 aa)
	fhod3	Formin homology 2 domain containing 3b. (1673 aa)
	W5M828_LEPOC	PH domain-containing protein. (850 aa)
	W5M916_LEPOC	Formin-like 3. (934 aa)
	W5M969_LEPOC	Erythrocyte membrane protein band 4.1a. (1004 aa)
	pdcd6ip	Programmed cell death 6 interacting protein. (884 aa)
	racgap1	Rac GTPase activating protein 1. (654 aa)
	LLGL1	LLGL scribble cell polarity complex component 1. (1067 aa)
	NCKAP1L	NCK associated protein 1 like. (1137 aa)
	W5MCQ1_LEPOC	Rho related BTB domain containing 4. (670 aa)
	rhof	Ras homolog family member F. (215 aa)
	amotl2	Angiomotin like 2b. (728 aa)
	fmnl2	Formin-like 2a. (1088 aa)
	W5MF21_LEPOC	A kinase (PRKA) anchor protein 11. (1845 aa)
	nckap1	NCK-associated protein 1. (1134 aa)
	W5MI66_LEPOC	RAB13, member RAS oncogene family. (162 aa)
	rhobtb1	Rho related BTB domain containing 1. (693 aa)
	anln	Anillin, actin binding protein. (1217 aa)
	rnd1	Rho family GTPase 1a. (232 aa)
	W5MNV7_LEPOC	Formin homology 2 domain containing 1. (1407 aa)
	rac1	Rac family small GTPase 1b. (195 aa)
	ppp2r3c	Protein phosphatase 2, regulatory subunit B'', gamma. (454 aa)
	cdk5	Cyclin-dependent kinase 5; Belongs to the protein kinase superfamily. (292 aa)
	rhoc	Ras homolog family member Cb. (202 aa)
	rnd2	Rho family GTPase 2. (241 aa)
	llgl2	LLGL scribble cell polarity complex component 2. (1020 aa)
	strip1	Striatin interacting protein 1. (814 aa)
	W5N1V6_LEPOC	Formin-like 1a. (1081 aa)
	RAC3	Rac family small GTPase 3. (192 aa)
	LOC102682211	Ras homolog gene family, member Ab. (193 aa)
	W5NAW2_LEPOC	Ras homolog gene family, member Ab. (202 aa)
	rhobtb2	Rho related BTB domain containing 2a. (729 aa)
	plek	Pleckstrin. (353 aa)
	W5NIY2_LEPOC	Rho-associated, coiled-coil containing protein kinase 2b; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. (1449 aa)
	EPB41L2	Erythrocyte membrane protein band 4.1 like 2. (980 aa)
	LOC102690743	Ras homolog gene family, member Gc. (191 aa)
	arf6	ADP-ribosylation factor 6b; Belongs to the small GTPase superfamily. Arf family. (175 aa)
	rhob	Uncharacterized protein. (196 aa)
	rhog	Ras homolog family member Gb. (191 aa)

Your Current Organism:

Lepisosteus oculatus

NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LLGL1	llgl2	ENSLOCP00000005990	ENSLOCP00000014079	LLGL scribble cell polarity complex component 1.	LLGL scribble cell polarity complex component 2.	0.858
LOC102682211	LOC102682992	ENSLOCP00000017610	ENSLOCP00000000809	Ras homolog gene family, member Ab.	Si:ch1073-416j23.1.	0.645
LOC102682211	LOC102690743	ENSLOCP00000017610	ENSLOCP00000021588	Ras homolog gene family, member Ab.	Ras homolog gene family, member Gc.	0.585
LOC102682211	NCKAP1L	ENSLOCP00000017610	ENSLOCP00000006113	Ras homolog gene family, member Ab.	NCK associated protein 1 like.	0.544
LOC102682211	RAC3	ENSLOCP00000017610	ENSLOCP00000015230	Ras homolog gene family, member Ab.	Rac family small GTPase 3.	0.681
LOC102682211	W5M1U6_LEPOC	ENSLOCP00000017610	ENSLOCP00000002354	Ras homolog gene family, member Ab.	Rho-associated, coiled-coil containing protein kinase 1; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family.	0.876
LOC102682211	W5M828_LEPOC	ENSLOCP00000017610	ENSLOCP00000004536	Ras homolog gene family, member Ab.	PH domain-containing protein.	0.799
LOC102682211	W5M916_LEPOC	ENSLOCP00000017610	ENSLOCP00000004875	Ras homolog gene family, member Ab.	Formin-like 3.	0.641
LOC102682211	W5N1V6_LEPOC	ENSLOCP00000017610	ENSLOCP00000014615	Ras homolog gene family, member Ab.	Formin-like 1a.	0.641
LOC102682211	W5NIY2_LEPOC	ENSLOCP00000017610	ENSLOCP00000020591	Ras homolog gene family, member Ab.	Rho-associated, coiled-coil containing protein kinase 2b; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family.	0.876
LOC102682211	anln	ENSLOCP00000017610	ENSLOCP00000008546	Ras homolog gene family, member Ab.	Anillin, actin binding protein.	0.799
LOC102682211	arf6	ENSLOCP00000017610	ENSLOCP00000021810	Ras homolog gene family, member Ab.	ADP-ribosylation factor 6b; Belongs to the small GTPase superfamily. Arf family.	0.514
LOC102682211	fmnl2	ENSLOCP00000017610	ENSLOCP00000006737	Ras homolog gene family, member Ab.	Formin-like 2a.	0.641
LOC102682211	nckap1	ENSLOCP00000017610	ENSLOCP00000008041	Ras homolog gene family, member Ab.	NCK-associated protein 1.	0.544
LOC102682211	rac1	ENSLOCP00000017610	ENSLOCP00000010207	Ras homolog gene family, member Ab.	Rac family small GTPase 1b.	0.681
LOC102682211	racgap1	ENSLOCP00000017610	ENSLOCP00000005658	Ras homolog gene family, member Ab.	Rac GTPase activating protein 1.	0.645
LOC102682211	rhof	ENSLOCP00000017610	ENSLOCP00000006224	Ras homolog gene family, member Ab.	Ras homolog family member F.	0.547
LOC102682211	rhog	ENSLOCP00000017610	ENSLOCP00000022124	Ras homolog gene family, member Ab.	Ras homolog family member Gb.	0.585
LOC102682211	rnd1	ENSLOCP00000017610	ENSLOCP00000008942	Ras homolog gene family, member Ab.	Rho family GTPase 1a.	0.524
LOC102682211	rnd3	ENSLOCP00000017610	ENSLOCP00000001797	Ras homolog gene family, member Ab.	Rho family GTPase 3b.	0.521