(14 nodes) Regulation of polysaccharide biosynthetic process network (Lepisosteus oculatus)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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second shell of interactors

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proteins of unknown 3D structure

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Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

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textmining

co-expression

protein homology

Your Input:
	igf2	Insulin-like growth factor 2b. (217 aa)
	ppp1r3d	Protein phosphatase 1, regulatory subunit 3Db. (268 aa)
	W5NM29_LEPOC	CBM21 domain-containing protein. (301 aa)
	W5NLZ3_LEPOC	Protein phosphatase 1 regulatory subunit. (305 aa)
	LOC102689970	Zgc:77112. (313 aa)
	W5NAU5_LEPOC	CBM21 domain-containing protein. (295 aa)
	W5N9Y4_LEPOC	Transforming growth factor beta; Belongs to the TGF-beta family. (392 aa)
	ppp1r3g	Si:ch211-152c8.5. (236 aa)
	PDGFB	Platelet derived growth factor subunit B; Belongs to the PDGF/VEGF growth factor family. (268 aa)
	W5MFV0_LEPOC	PAS domain containing serine/threonine kinase. (1166 aa)
	ppp1r3c	Protein phosphatase 1 regulatory subunit 3C; Acts as a glycogen-targeting subunit for PP1 and regulates its activity. Activates glycogen synthase, reduces glycogen phosphorylase activity and limits glycogen breakdown. (320 aa)
	cltc	Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family. (1688 aa)
	smpd3	Sphingomyelin phosphodiesterase 3, neutral. (638 aa)
	W5M302_LEPOC	Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family. (1363 aa)

Your Current Organism:

Lepisosteus oculatus

NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC102689970	W5NAU5_LEPOC	ENSLOCP00000019819	ENSLOCP00000017754	Zgc:77112.	CBM21 domain-containing protein.	0.540
LOC102689970	W5NLZ3_LEPOC	ENSLOCP00000019819	ENSLOCP00000021652	Zgc:77112.	Protein phosphatase 1 regulatory subunit.	0.584
LOC102689970	W5NM29_LEPOC	ENSLOCP00000019819	ENSLOCP00000021688	Zgc:77112.	CBM21 domain-containing protein.	0.540
LOC102689970	ppp1r3c	ENSLOCP00000019819	ENSLOCP00000007257	Zgc:77112.	Protein phosphatase 1 regulatory subunit 3C; Acts as a glycogen-targeting subunit for PP1 and regulates its activity. Activates glycogen synthase, reduces glycogen phosphorylase activity and limits glycogen breakdown.	0.568
LOC102689970	ppp1r3d	ENSLOCP00000019819	ENSLOCP00000022460	Zgc:77112.	Protein phosphatase 1, regulatory subunit 3Db.	0.540
LOC102689970	ppp1r3g	ENSLOCP00000019819	ENSLOCP00000014321	Zgc:77112.	Si:ch211-152c8.5.	0.540
PDGFB	igf2	ENSLOCP00000014057	ENSLOCP00000002094	Platelet derived growth factor subunit B; Belongs to the PDGF/VEGF growth factor family.	Insulin-like growth factor 2b.	0.711
W5M302_LEPOC	cltc	ENSLOCP00000002760	ENSLOCP00000004653	Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.	Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.	0.544
W5NAU5_LEPOC	LOC102689970	ENSLOCP00000017754	ENSLOCP00000019819	CBM21 domain-containing protein.	Zgc:77112.	0.540
W5NAU5_LEPOC	W5NLZ3_LEPOC	ENSLOCP00000017754	ENSLOCP00000021652	CBM21 domain-containing protein.	Protein phosphatase 1 regulatory subunit.	0.540
W5NAU5_LEPOC	W5NM29_LEPOC	ENSLOCP00000017754	ENSLOCP00000021688	CBM21 domain-containing protein.	CBM21 domain-containing protein.	0.575
W5NAU5_LEPOC	ppp1r3c	ENSLOCP00000017754	ENSLOCP00000007257	CBM21 domain-containing protein.	Protein phosphatase 1 regulatory subunit 3C; Acts as a glycogen-targeting subunit for PP1 and regulates its activity. Activates glycogen synthase, reduces glycogen phosphorylase activity and limits glycogen breakdown.	0.540
W5NAU5_LEPOC	ppp1r3d	ENSLOCP00000017754	ENSLOCP00000022460	CBM21 domain-containing protein.	Protein phosphatase 1, regulatory subunit 3Db.	0.569
W5NAU5_LEPOC	ppp1r3g	ENSLOCP00000017754	ENSLOCP00000014321	CBM21 domain-containing protein.	Si:ch211-152c8.5.	0.540
W5NLZ3_LEPOC	LOC102689970	ENSLOCP00000021652	ENSLOCP00000019819	Protein phosphatase 1 regulatory subunit.	Zgc:77112.	0.584
W5NLZ3_LEPOC	W5NAU5_LEPOC	ENSLOCP00000021652	ENSLOCP00000017754	Protein phosphatase 1 regulatory subunit.	CBM21 domain-containing protein.	0.540
W5NLZ3_LEPOC	W5NM29_LEPOC	ENSLOCP00000021652	ENSLOCP00000021688	Protein phosphatase 1 regulatory subunit.	CBM21 domain-containing protein.	0.853
W5NLZ3_LEPOC	ppp1r3c	ENSLOCP00000021652	ENSLOCP00000007257	Protein phosphatase 1 regulatory subunit.	Protein phosphatase 1 regulatory subunit 3C; Acts as a glycogen-targeting subunit for PP1 and regulates its activity. Activates glycogen synthase, reduces glycogen phosphorylase activity and limits glycogen breakdown.	0.927
W5NLZ3_LEPOC	ppp1r3d	ENSLOCP00000021652	ENSLOCP00000022460	Protein phosphatase 1 regulatory subunit.	Protein phosphatase 1, regulatory subunit 3Db.	0.861
W5NLZ3_LEPOC	ppp1r3g	ENSLOCP00000021652	ENSLOCP00000014321	Protein phosphatase 1 regulatory subunit.	Si:ch211-152c8.5.	0.540