STRINGSTRING
W5NA52_LEPOC W5NA52_LEPOC taf5l taf5l supt3h supt3h taf12 taf12 W5M3F8_LEPOC W5M3F8_LEPOC W5MQE4_LEPOC W5MQE4_LEPOC W5M2A3_LEPOC W5M2A3_LEPOC ATXN7L1 ATXN7L1 sf3b5 sf3b5 W5NKQ2_LEPOC W5NKQ2_LEPOC mysm1 mysm1 atxn7 atxn7 TADA1 TADA1 W5N1K4_LEPOC W5N1K4_LEPOC atxn7l2 atxn7l2 taf6 taf6
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
W5NA52_LEPOCUbiquitin carboxyl-terminal hydrolase. (554 aa)
taf5lTAF5-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor. (493 aa)
supt3hSPT3 homolog, SAGA and STAGA complex component. (382 aa)
taf12TAF12 RNA polymerase II, TATA box binding protein (TBP)-associated factor. (216 aa)
W5M3F8_LEPOCTAF10 RNA polymerase II, TATA box binding protein (TBP)-associated factor. (186 aa)
W5MQE4_LEPOCTransformation/transcription domain-associated protein; Belongs to the PI3/PI4-kinase family. (3821 aa)
W5M2A3_LEPOCTAF6-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor. (197 aa)
ATXN7L1Ataxin 7 like 1. (836 aa)
sf3b5Splicing factor 3B subunit 5; Belongs to the SF3B5 family. (86 aa)
W5NKQ2_LEPOCSPT7 like, STAGA complex gamma subunit. (418 aa)
mysm1Myb-like, SWIRM and MPN domains 1. (827 aa)
atxn7Ataxin 7. (868 aa)
TADA1Transcriptional adaptor 1. (334 aa)
W5N1K4_LEPOCTAF5 RNA polymerase II, TATA box binding protein (TBP)-associated factor. (772 aa)
atxn7l2Ataxin 7-like 2a. (759 aa)
taf6TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor. (668 aa)
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.