STRINGSTRING
W5MRP9_LEPOC W5MRP9_LEPOC TNIP3 TNIP3 ppm1a ppm1a LOC102686811 LOC102686811 CASP8 CASP8 W5MXT6_LEPOC W5MXT6_LEPOC LOC102697829 LOC102697829 sirt1 sirt1 tnip1 tnip1 zmynd11 zmynd11 OTUD7A OTUD7A LOC102689167 LOC102689167 nr1h4 nr1h4 W5NEC4_LEPOC W5NEC4_LEPOC ppm1b ppm1b tank tank LOC102691632 LOC102691632 ash1l ash1l W5MGK5_LEPOC W5MGK5_LEPOC chuk chuk usp10 usp10 W5M8I7_LEPOC W5M8I7_LEPOC W5M609_LEPOC W5M609_LEPOC riok3 riok3 W5LVE4_LEPOC W5LVE4_LEPOC
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
W5MRP9_LEPOCOTU deubiquitinase 7B. (930 aa)
TNIP3TNFAIP3 interacting protein 3. (324 aa)
ppm1aProtein phosphatase, Mg2+/Mn2+ dependent, 1Aa. (383 aa)
LOC102686811Uncharacterized protein. (512 aa)
CASP8Caspase 8; Belongs to the peptidase C14A family. (543 aa)
W5MXT6_LEPOCCaspase 8; Belongs to the peptidase C14A family. (552 aa)
LOC102697829Uncharacterized protein; Belongs to the peptidase C14A family. (474 aa)
sirt1Sirtuin 1. (720 aa)
tnip1TNFAIP3 interacting protein 1. (651 aa)
zmynd11Zinc finger, MYND-type containing 11. (626 aa)
OTUD7AOTU deubiquitinase 7A. (937 aa)
LOC102689167Protein phosphatase, Mg2+/Mn2+ dependent, 1Nb (putative). (421 aa)
nr1h4Nuclear receptor subfamily 1, group H, member 4. (486 aa)
W5NEC4_LEPOCTumor necrosis factor, alpha-induced protein 3. (776 aa)
ppm1bProtein phosphatase, Mg2+/Mn2+ dependent, 1Bb. (403 aa)
tankTRAF family member-associated NFKB activator. (317 aa)
LOC102691632Adiponectin, C1Q and collagen domain containing, b. (266 aa)
ash1lBAH domain-containing protein. (175 aa)
W5MGK5_LEPOCNuclear receptor subfamily 1, group D, member 4b. (362 aa)
chukComponent of inhibitor of nuclear factor kappa B kinase complex. (763 aa)
usp10Ubiquitin carboxyl-terminal hydrolase. (903 aa)
W5M8I7_LEPOCNLR family member X1. (935 aa)
W5M609_LEPOCSi:dkey-206d17.12. (622 aa)
riok3Serine/threonine-protein kinase RIO3; Belongs to the protein kinase superfamily. RIO-type Ser/Thr kinase family. (511 aa)
W5LVE4_LEPOCSET domain-containing protein. (117 aa)
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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