11 items (Lepisosteus oculatus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	W5LX21_LEPOC	Uncharacterized protein. (97 aa)
	ctnnb1	Catenin (cadherin-associated protein), beta 1. (780 aa)
	LOC102691961	Cadherin 26, tandem duplicate 1; Cadherins are calcium-dependent cell adhesion proteins. (856 aa)
	LOC107079563	Uncharacterized protein. (813 aa)
	LOC107079562	Uncharacterized protein. (860 aa)
	W5MAE7_LEPOC	Vinculin a. (1122 aa)
	W5MAG4_LEPOC	Uncharacterized protein. (171 aa)
	pkp3	Uncharacterized protein. (381 aa)
	numb	NUMB endocytic adaptor protein. (656 aa)
	LOC102695806	Junction plakoglobin b. (738 aa)
	W5NB42_LEPOC	PID domain-containing protein. (209 aa)

Your Current Organism:

Lepisosteus oculatus

NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC102691961	LOC102695806	ENSLOCP00000004283	ENSLOCP00000016854	Cadherin 26, tandem duplicate 1; Cadherins are calcium-dependent cell adhesion proteins.	Junction plakoglobin b.	0.741
LOC102691961	LOC107079562	ENSLOCP00000004283	ENSLOCP00000004346	Cadherin 26, tandem duplicate 1; Cadherins are calcium-dependent cell adhesion proteins.	Uncharacterized protein.	0.540
LOC102691961	LOC107079563	ENSLOCP00000004283	ENSLOCP00000004326	Cadherin 26, tandem duplicate 1; Cadherins are calcium-dependent cell adhesion proteins.	Uncharacterized protein.	0.540
LOC102691961	ctnnb1	ENSLOCP00000004283	ENSLOCP00000001573	Cadherin 26, tandem duplicate 1; Cadherins are calcium-dependent cell adhesion proteins.	Catenin (cadherin-associated protein), beta 1.	0.741
LOC102695806	LOC102691961	ENSLOCP00000016854	ENSLOCP00000004283	Junction plakoglobin b.	Cadherin 26, tandem duplicate 1; Cadherins are calcium-dependent cell adhesion proteins.	0.741
LOC102695806	LOC107079562	ENSLOCP00000016854	ENSLOCP00000004346	Junction plakoglobin b.	Uncharacterized protein.	0.741
LOC102695806	LOC107079563	ENSLOCP00000016854	ENSLOCP00000004326	Junction plakoglobin b.	Uncharacterized protein.	0.741
LOC102695806	W5LX21_LEPOC	ENSLOCP00000016854	ENSLOCP00000000678	Junction plakoglobin b.	Uncharacterized protein.	0.718
LOC102695806	W5MAE7_LEPOC	ENSLOCP00000016854	ENSLOCP00000005356	Junction plakoglobin b.	Vinculin a.	0.752
LOC102695806	W5MAG4_LEPOC	ENSLOCP00000016854	ENSLOCP00000005373	Junction plakoglobin b.	Uncharacterized protein.	0.752
LOC102695806	ctnnb1	ENSLOCP00000016854	ENSLOCP00000001573	Junction plakoglobin b.	Catenin (cadherin-associated protein), beta 1.	0.985
LOC102695806	pkp3	ENSLOCP00000016854	ENSLOCP00000008066	Junction plakoglobin b.	Uncharacterized protein.	0.719
LOC107079562	LOC102691961	ENSLOCP00000004346	ENSLOCP00000004283	Uncharacterized protein.	Cadherin 26, tandem duplicate 1; Cadherins are calcium-dependent cell adhesion proteins.	0.540
LOC107079562	LOC102695806	ENSLOCP00000004346	ENSLOCP00000016854	Uncharacterized protein.	Junction plakoglobin b.	0.741
LOC107079562	LOC107079563	ENSLOCP00000004346	ENSLOCP00000004326	Uncharacterized protein.	Uncharacterized protein.	0.547
LOC107079562	ctnnb1	ENSLOCP00000004346	ENSLOCP00000001573	Uncharacterized protein.	Catenin (cadherin-associated protein), beta 1.	0.741
LOC107079563	LOC102691961	ENSLOCP00000004326	ENSLOCP00000004283	Uncharacterized protein.	Cadherin 26, tandem duplicate 1; Cadherins are calcium-dependent cell adhesion proteins.	0.540
LOC107079563	LOC102695806	ENSLOCP00000004326	ENSLOCP00000016854	Uncharacterized protein.	Junction plakoglobin b.	0.741
LOC107079563	LOC107079562	ENSLOCP00000004326	ENSLOCP00000004346	Uncharacterized protein.	Uncharacterized protein.	0.547
LOC107079563	ctnnb1	ENSLOCP00000004326	ENSLOCP00000001573	Uncharacterized protein.	Catenin (cadherin-associated protein), beta 1.	0.741