48 items (Lepisosteus oculatus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ptgs2	Prostaglandin-endoperoxide synthase 2b. (610 aa)
	W5LZ92_LEPOC	BSCL2 lipid droplet biogenesis associated, seipin, like. (265 aa)
	ctbp1	C-terminal binding protein 1; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. (441 aa)
	aldh6a1	Aldehyde dehydrogenase 6 family, member A1. (525 aa)
	tmem120b	Transmembrane protein 120B. (340 aa)
	prlh	Prolactin releasing hormone. (85 aa)
	W5MAH5_LEPOC	Nuclear receptor subfamily 4, group A, member 1. (608 aa)
	ZNF516	Zinc finger protein 516. (1192 aa)
	LOC102692789	Activating transcription factor 5a. (516 aa)
	bbs7	Bardet-Biedl syndrome 7 protein homolog; The BBSome complex is thought to function as a coat complex required for sorting of specific membrane proteins to the primary cilia. The BBSome complex is required for ciliogenesis but is dispensable for centriolar satellite function. (718 aa)
	bbs12	Bardet-Biedl syndrome 12. (690 aa)
	plac8	Placenta associated 8, tandem duplicate 1. (107 aa)
	W5M3R4_LEPOC	Bardet-Biedl syndrome 1. (507 aa)
	bbs9	Bardet-Biedl syndrome 9. (960 aa)
	dhrs7b	Dehydrogenase/reductase (SDR family) member 7B; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (324 aa)
	sirt1	Sirtuin 1. (720 aa)
	tmem120a	Zgc:103681. (359 aa)
	cebpb	CCAAT/enhancer-binding protein. (295 aa)
	adrb1	Adrenoceptor beta 1. (397 aa)
	socs1	Suppressor of cytokine signaling 1a. (202 aa)
	W5NN97_LEPOC	LRRCT domain-containing protein. (337 aa)
	cebpd	CCAAT/enhancer-binding protein. (297 aa)
	LOC102690509	G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family. (293 aa)
	trim32	Tripartite motif containing 32. (646 aa)
	ADGRF5	Adhesion G protein-coupled receptor F5; Belongs to the G-protein coupled receptor 2 family. (1294 aa)
	mkks	McKusick-Kaufman syndrome. (570 aa)
	W5NEK6_LEPOC	Family with sequence similarity 120B. (784 aa)
	W5NCR0_LEPOC	Adrenoceptor beta 3a. (462 aa)
	W5NCP5_LEPOC	Bardet-Biedl syndrome 4. (480 aa)
	W5NAB2_LEPOC	Uncharacterized protein. (116 aa)
	metrnl	Meteorin like, glial cell differentiation regulator b. (304 aa)
	med1	Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. (1734 aa)
	retreg1	Reticulophagy regulator 1. (450 aa)
	cntn2	Contactin 2. (1047 aa)
	W5N0P4_LEPOC	E1A binding protein p300 a. (2068 aa)
	LAMB3	Laminin subunit beta 3. (1164 aa)
	W5MDA1_LEPOC	Si:ch73-90p23.1; Belongs to the G-protein coupled receptor 1 family. (325 aa)
	prdm16	Si:ch211-263k4.2. (1325 aa)
	nr4a3	Nuclear receptor subfamily 4, group A, member 3. (682 aa)
	W5MDL8_LEPOC	Si:ch211-231m23.4; Belongs to the G-protein coupled receptor 1 family. (327 aa)
	NR4A2	Nuclear receptor subfamily 4, group A, member 2b. (595 aa)
	LOC102691632	Adiponectin, C1Q and collagen domain containing, b. (266 aa)
	ctbp2	C-terminal binding protein 2a. (1027 aa)
	LOC102698011	Adrenoceptor beta 2, surface a. (460 aa)
	W5MTG2_LEPOC	Uncharacterized protein. (127 aa)
	LOC102692404	C-terminal binding protein 1; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. (450 aa)
	W5MWM9_LEPOC	Tetratricopeptide repeat domain 8. (477 aa)
	steap4	STEAP family member 4. (507 aa)

Your Current Organism:

Lepisosteus oculatus

NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC102691632	W5NCR0_LEPOC	ENSLOCP00000008517	ENSLOCP00000018419	Adiponectin, C1Q and collagen domain containing, b.	Adrenoceptor beta 3a.	0.407
LOC102691632	cebpb	ENSLOCP00000008517	ENSLOCP00000022459	Adiponectin, C1Q and collagen domain containing, b.	CCAAT/enhancer-binding protein.	0.650
LOC102691632	sirt1	ENSLOCP00000008517	ENSLOCP00000013852	Adiponectin, C1Q and collagen domain containing, b.	Sirtuin 1.	0.510
LOC102692404	W5MTG2_LEPOC	ENSLOCP00000011701	ENSLOCP00000011671	C-terminal binding protein 1; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.	Uncharacterized protein.	0.407
LOC102692404	W5N0P4_LEPOC	ENSLOCP00000011701	ENSLOCP00000014203	C-terminal binding protein 1; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.	E1A binding protein p300 a.	0.464
LOC102692404	ZNF516	ENSLOCP00000011701	ENSLOCP00000004743	C-terminal binding protein 1; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.	Zinc finger protein 516.	0.637
LOC102692404	ctbp1	ENSLOCP00000011701	ENSLOCP00000013457	C-terminal binding protein 1; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.	C-terminal binding protein 1; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.	0.837
LOC102692404	ctbp2	ENSLOCP00000011701	ENSLOCP00000009690	C-terminal binding protein 1; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.	C-terminal binding protein 2a.	0.849
LOC102692404	dhrs7b	ENSLOCP00000011701	ENSLOCP00000002417	C-terminal binding protein 1; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.	Dehydrogenase/reductase (SDR family) member 7B; Belongs to the short-chain dehydrogenases/reductases (SDR) family.	0.424
LOC102692404	med1	ENSLOCP00000011701	ENSLOCP00000015717	C-terminal binding protein 1; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.	Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors.	0.586
LOC102692404	prdm16	ENSLOCP00000011701	ENSLOCP00000006441	C-terminal binding protein 1; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.	Si:ch211-263k4.2.	0.407
LOC102692789	W5N0P4_LEPOC	ENSLOCP00000004215	ENSLOCP00000014203	Activating transcription factor 5a.	E1A binding protein p300 a.	0.685
LOC102692789	cebpb	ENSLOCP00000004215	ENSLOCP00000022459	Activating transcription factor 5a.	CCAAT/enhancer-binding protein.	0.724
LOC102692789	cebpd	ENSLOCP00000004215	ENSLOCP00000021920	Activating transcription factor 5a.	CCAAT/enhancer-binding protein.	0.717
LOC102698011	W5NCR0_LEPOC	ENSLOCP00000011407	ENSLOCP00000018419	Adrenoceptor beta 2, surface a.	Adrenoceptor beta 3a.	0.802
LOC102698011	adrb1	ENSLOCP00000011407	ENSLOCP00000022354	Adrenoceptor beta 2, surface a.	Adrenoceptor beta 1.	0.567
NR4A2	W5N0P4_LEPOC	ENSLOCP00000006932	ENSLOCP00000014203	Nuclear receptor subfamily 4, group A, member 2b.	E1A binding protein p300 a.	0.424
NR4A2	med1	ENSLOCP00000006932	ENSLOCP00000015717	Nuclear receptor subfamily 4, group A, member 2b.	Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors.	0.583
NR4A2	plac8	ENSLOCP00000006932	ENSLOCP00000013053	Nuclear receptor subfamily 4, group A, member 2b.	Placenta associated 8, tandem duplicate 1.	0.415
W5M3R4_LEPOC	W5MWM9_LEPOC	ENSLOCP00000003022	ENSLOCP00000012788	Bardet-Biedl syndrome 1.	Tetratricopeptide repeat domain 8.	0.996