72 items (Lepisosteus oculatus) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	dmc1	Uncharacterized protein. (94 aa)
	cntn2	Contactin 2. (1047 aa)
	bdh2	3-hydroxybutyrate dehydrogenase, type 2. (249 aa)
	tdrd1	Tudor domain containing 1. (1116 aa)
	EREG	Epiregulin. (153 aa)
	W5N5F5_LEPOC	Bucky ball. (631 aa)
	gldn	Gliomedin. (510 aa)
	epo	Erythropoietin a. (192 aa)
	ropn1l	Rhophilin associated tail protein 1-like. (220 aa)
	fem1b	Fem-1 homolog b (C. elegans). (627 aa)
	W5N9Y4_LEPOC	Transforming growth factor beta; Belongs to the TGF-beta family. (392 aa)
	tusc2	Tumor suppressor 2, mitochondrial calcium regulator a. (112 aa)
	abhd2	Abhydrolase domain containing 2a. (435 aa)
	W5NA84_LEPOC	Ion_trans domain-containing protein. (550 aa)
	W5NAQ1_LEPOC	Excision repair cross-complementation group 2. (760 aa)
	gata2	GATA binding protein 2a. (464 aa)
	W5NBX2_LEPOC	Methyl CpG binding protein 2. (499 aa)
	slc25a37	Solute carrier family 25 member 37; Belongs to the mitochondrial carrier (TC 2.A.29) family. (337 aa)
	star	Steroidogenic acute regulatory protein, mitochondrial; Plays a key role in steroid hormone synthesis by enhancing the metabolism of cholesterol into pregnenolone. Mediates the transfer of cholesterol from the outer mitochondrial membrane to the inner mitochondrial membrane where it is cleaved to pregnenolone. (284 aa)
	W5NEA6_LEPOC	Luteinizing hormone, beta polypeptide. (147 aa)
	fbxo5	F-box protein 5. (394 aa)
	ntn4	Netrin 4. (634 aa)
	six3	SIX homeobox 3a. (296 aa)
	W5NIA3_LEPOC	Tudor domain containing 6. (1612 aa)
	W5NKW3_LEPOC	Si:dkeyp-93d12.1. (1790 aa)
	ccr6	Chemokine (C-C motif) receptor 6a; Belongs to the G-protein coupled receptor 1 family. (362 aa)
	paqr8	Progestin and adipoQ receptor family member VIII. (350 aa)
	LOC102688511	Progestin and adipoQ receptor family member VII, b. (352 aa)
	LOC102696301	Uncharacterized protein. (295 aa)
	W5LWZ8_LEPOC	DEAD_2 domain-containing protein. (153 aa)
	pla2g10	Phospholipase A(2). (154 aa)
	EPHA8	EPH receptor A8. (996 aa)
	W5LYJ4_LEPOC	Methenyltetrahydrofolate synthetase domain containing. (434 aa)
	LOC102694060	SIX homeobox 7. (231 aa)
	TUT7	Terminal uridylyl transferase 7. (1457 aa)
	ybx1	Y box binding protein 1. (311 aa)
	W5M5P7_LEPOC	Uncharacterized protein. (701 aa)
	srrm4	Serine/arginine repetitive matrix 4. (614 aa)
	W5M709_LEPOC	Telomerase reverse transcriptase; Telomerase is a ribonucleoprotein enzyme essential for the replication of chromosome termini in most eukaryotes. It elongates telomeres. It is a reverse transcriptase that adds simple sequence repeats to chromosome ends by copying a template sequence within the RNA component of the enzyme. (1056 aa)
	kdm1a	Lysine-specific histone demethylase; Histone demethylase that demethylates both 'Lys-4' (H3K4me) and 'Lys-9' (H3K9me) of histone H3, thereby acting as a coactivator or a corepressor, depending on the context. Acts by oxidizing the substrate by FAD to generate the corresponding imine that is subsequently hydrolyzed. Acts as a corepressor by mediating demethylation of H3K4me, a specific tag for epigenetic transcriptional activation. Demethylates both mono- (H3K4me1) and di-methylated (H3K4me2) H3K4me; Belongs to the flavin monoamine oxidase family. (859 aa)
	ythdf2	YTH N(6)-methyladenosine RNA binding protein 2. (621 aa)
	ROPN1	Rhophilin associated tail protein 1. (216 aa)
	C1QA	Complement C1q A chain. (251 aa)
	dctn2	Dynactin 2 (p50). (409 aa)
	TUT4	Terminal uridylyl transferase 4. (1423 aa)
	W5MHJ6_LEPOC	RIIa domain-containing protein. (1070 aa)
	LOC102687566	UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 6. (384 aa)
	W5MIC9_LEPOC	Uncharacterized protein. (300 aa)
	W5MK04_LEPOC	Uncharacterized protein. (143 aa)
	W5MLK4_LEPOC	Uncharacterized protein. (203 aa)
	cbfb	Core-binding factor subunit beta. (187 aa)
	edn1	Endothelin 1. (200 aa)
	pld6	Phospholipase D family, member 6. (229 aa)
	W5MNK3_LEPOC	Tower domain-containing protein. (871 aa)
	fam20c	FAM20C golgi associated secretory pathway kinase b. (570 aa)
	slc40a1	Solute carrier family 40 protein; May be involved in iron transport and iron homeostasis. Belongs to the ferroportin (FP) (TC 2.A.100) family. SLC40A subfamily. (573 aa)
	ednra	Endothelin receptor type Aa; Belongs to the G-protein coupled receptor 1 family. (433 aa)
	rb1	Retinoblastoma 1. (932 aa)
	W5MRP2_LEPOC	Uncharacterized protein. (711 aa)
	EFCAB9	EF-hand calcium binding domain 9. (205 aa)
	LOC102695979	Zgc:113054. (550 aa)
	six6	SIX homeobox 6a. (265 aa)
	CATSPER3	Cation channel sperm associated 3. (412 aa)
	myoc	Myocilin. (487 aa)
	ccnb1	Cyclin B1; Belongs to the cyclin family. (398 aa)
	sclt1	Sodium channel and clathrin linker 1. (687 aa)
	maea	Macrophage erythroblast attacher. (404 aa)
	WDR77	WD repeat domain 77. (345 aa)
	tdrd7	Tudor domain containing 7 a. (1066 aa)
	tdrkh	Tudor and KH domain containing. (583 aa)
	rest	RE1-silencing transcription factor. (1060 aa)
	ret	Proto-oncogene tyrosine-protein kinase receptor Ret; Receptor tyrosine-protein kinase involved in numerous cellular mechanisms including cell proliferation, neuronal navigation, cell migration, and cell differentiation upon binding with glial cell derived neurotrophic factor family ligands. (1111 aa)

Your Current Organism:

Lepisosteus oculatus

NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar

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structured XML interaction data, according to the 'PSI-MI' data standard

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CATSPER3	EFCAB9	ENSLOCP00000012430	ENSLOCP00000011377	Cation channel sperm associated 3.	EF-hand calcium binding domain 9.	0.943
CATSPER3	W5M5P7_LEPOC	ENSLOCP00000012430	ENSLOCP00000003705	Cation channel sperm associated 3.	Uncharacterized protein.	0.986
CATSPER3	W5NA84_LEPOC	ENSLOCP00000012430	ENSLOCP00000017543	Cation channel sperm associated 3.	Ion_trans domain-containing protein.	0.990
EFCAB9	CATSPER3	ENSLOCP00000011377	ENSLOCP00000012430	EF-hand calcium binding domain 9.	Cation channel sperm associated 3.	0.943
EFCAB9	W5M5P7_LEPOC	ENSLOCP00000011377	ENSLOCP00000003705	EF-hand calcium binding domain 9.	Uncharacterized protein.	0.809
EFCAB9	W5NA84_LEPOC	ENSLOCP00000011377	ENSLOCP00000017543	EF-hand calcium binding domain 9.	Ion_trans domain-containing protein.	0.854
EREG	ret	ENSLOCP00000014832	ENSLOCP00000014134	Epiregulin.	Proto-oncogene tyrosine-protein kinase receptor Ret; Receptor tyrosine-protein kinase involved in numerous cellular mechanisms including cell proliferation, neuronal navigation, cell migration, and cell differentiation upon binding with glial cell derived neurotrophic factor family ligands.	0.510
LOC102695979	gata2	ENSLOCP00000012279	ENSLOCP00000017894	Zgc:113054.	GATA binding protein 2a.	0.427
W5LWZ8_LEPOC	W5M709_LEPOC	ENSLOCP00000000655	ENSLOCP00000004167	DEAD_2 domain-containing protein.	Telomerase reverse transcriptase; Telomerase is a ribonucleoprotein enzyme essential for the replication of chromosome termini in most eukaryotes. It elongates telomeres. It is a reverse transcriptase that adds simple sequence repeats to chromosome ends by copying a template sequence within the RNA component of the enzyme.	0.535
W5LWZ8_LEPOC	W5MNK3_LEPOC	ENSLOCP00000000655	ENSLOCP00000009962	DEAD_2 domain-containing protein.	Tower domain-containing protein.	0.665
W5LWZ8_LEPOC	dmc1	ENSLOCP00000000655	ENSLOCP00000014485	DEAD_2 domain-containing protein.	Uncharacterized protein.	0.430
W5M5P7_LEPOC	CATSPER3	ENSLOCP00000003705	ENSLOCP00000012430	Uncharacterized protein.	Cation channel sperm associated 3.	0.986
W5M5P7_LEPOC	EFCAB9	ENSLOCP00000003705	ENSLOCP00000011377	Uncharacterized protein.	EF-hand calcium binding domain 9.	0.809
W5M5P7_LEPOC	W5NA84_LEPOC	ENSLOCP00000003705	ENSLOCP00000017543	Uncharacterized protein.	Ion_trans domain-containing protein.	0.988
W5M709_LEPOC	W5LWZ8_LEPOC	ENSLOCP00000004167	ENSLOCP00000000655	Telomerase reverse transcriptase; Telomerase is a ribonucleoprotein enzyme essential for the replication of chromosome termini in most eukaryotes. It elongates telomeres. It is a reverse transcriptase that adds simple sequence repeats to chromosome ends by copying a template sequence within the RNA component of the enzyme.	DEAD_2 domain-containing protein.	0.535
W5M709_LEPOC	W5NAQ1_LEPOC	ENSLOCP00000004167	ENSLOCP00000017710	Telomerase reverse transcriptase; Telomerase is a ribonucleoprotein enzyme essential for the replication of chromosome termini in most eukaryotes. It elongates telomeres. It is a reverse transcriptase that adds simple sequence repeats to chromosome ends by copying a template sequence within the RNA component of the enzyme.	Excision repair cross-complementation group 2.	0.535
W5MNK3_LEPOC	W5LWZ8_LEPOC	ENSLOCP00000009962	ENSLOCP00000000655	Tower domain-containing protein.	DEAD_2 domain-containing protein.	0.665
W5MNK3_LEPOC	W5NAQ1_LEPOC	ENSLOCP00000009962	ENSLOCP00000017710	Tower domain-containing protein.	Excision repair cross-complementation group 2.	0.665
W5MNK3_LEPOC	dmc1	ENSLOCP00000009962	ENSLOCP00000014485	Tower domain-containing protein.	Uncharacterized protein.	0.961
W5MRP2_LEPOC	pld6	ENSLOCP00000011051	ENSLOCP00000009875	Uncharacterized protein.	Phospholipase D family, member 6.	0.514