STRINGSTRING
W5LV61_LEPOC W5LV61_LEPOC W5LZ20_LEPOC W5LZ20_LEPOC pold3 pold3 ercc1 ercc1 ACTR5 ACTR5 xpa xpa sirt1 sirt1 ino80 ino80 W5N634_LEPOC W5N634_LEPOC
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
W5LV61_LEPOCDamage-specific DNA binding protein 1. (1044 aa)
W5LZ20_LEPOCMelanocyte-stimulating hormone receptor. (330 aa)
pold3Polymerase (DNA-directed), delta 3, accessory subunit. (473 aa)
ercc1Excision repair cross-complementation group 1. (418 aa)
ACTR5Actin related protein 5; Belongs to the actin family. (492 aa)
xpaXeroderma pigmentosum, complementation group A. (280 aa)
sirt1Sirtuin 1. (720 aa)
ino80INO80 complex ATPase subunit. (1554 aa)
W5N634_LEPOCXeroderma pigmentosum, complementation group C. (927 aa)
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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