17 items (Lepisosteus oculatus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	gnb1	Guanine nucleotide binding protein (G protein), beta polypeptide 1b. (340 aa)
	ripor3	RIPOR family member 3. (935 aa)
	W5MM02_LEPOC	Inositol polyphosphate phosphatase-like 1a. (1284 aa)
	rac1	Rac family small GTPase 1b. (195 aa)
	mospd2	Motile sperm domain containing 2. (526 aa)
	LOC102687711	CD99 molecule. (216 aa)
	tnfaip6	Tumor necrosis factor, alpha-induced protein 6. (261 aa)
	RAC3	Rac family small GTPase 3. (192 aa)
	mpp1	Membrane protein, palmitoylated 1; Belongs to the MAGUK family. (470 aa)
	W5NEX8_LEPOC	Cystic fibrosis transmembrane conductance regulator; Epithelial ion channel that plays an important role in the regulation of epithelial ion and water transport and fluid homeostasis. Mediates the transport of chloride ions across the cell membrane. Channel activity is coupled to ATP hydrolysis. The ion channel is also permeable to HCO(3-); selectivity depends on the extracellular chloride concentration. Exerts its function also by modulating the activity of other ion channels and transporters. Contributes to the regulation of the pH and the ion content of the epithelial fluid layer. (1508 aa)
	LOC102690743	Ras homolog gene family, member Gc. (191 aa)
	W5NN65_LEPOC	Chemokine (C-C motif) receptor 7; Belongs to the G-protein coupled receptor 1 family. (352 aa)
	rhog	Ras homolog family member Gb. (191 aa)
	c1qbp	Complement component 1, q subcomponent binding protein. (289 aa)
	W5MB09_LEPOC	RHO family interacting cell polarization regulator 2. (1079 aa)
	mdk	Midkine b. (145 aa)
	W5M429_LEPOC	Toll-interleukin 1 receptor (TIR) domain containing adaptor protein. (216 aa)

Your Current Organism:

Lepisosteus oculatus

NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC102690743	RAC3	ENSLOCP00000021588	ENSLOCP00000015230	Ras homolog gene family, member Gc.	Rac family small GTPase 3.	0.660
LOC102690743	W5MM02_LEPOC	ENSLOCP00000021588	ENSLOCP00000009411	Ras homolog gene family, member Gc.	Inositol polyphosphate phosphatase-like 1a.	0.420
LOC102690743	gnb1	ENSLOCP00000021588	ENSLOCP00000007434	Ras homolog gene family, member Gc.	Guanine nucleotide binding protein (G protein), beta polypeptide 1b.	0.528
LOC102690743	rac1	ENSLOCP00000021588	ENSLOCP00000010207	Ras homolog gene family, member Gc.	Rac family small GTPase 1b.	0.660
RAC3	LOC102690743	ENSLOCP00000015230	ENSLOCP00000021588	Rac family small GTPase 3.	Ras homolog gene family, member Gc.	0.660
RAC3	W5MM02_LEPOC	ENSLOCP00000015230	ENSLOCP00000009411	Rac family small GTPase 3.	Inositol polyphosphate phosphatase-like 1a.	0.424
RAC3	gnb1	ENSLOCP00000015230	ENSLOCP00000007434	Rac family small GTPase 3.	Guanine nucleotide binding protein (G protein), beta polypeptide 1b.	0.632
RAC3	rhog	ENSLOCP00000015230	ENSLOCP00000022124	Rac family small GTPase 3.	Ras homolog family member Gb.	0.660
W5MM02_LEPOC	LOC102690743	ENSLOCP00000009411	ENSLOCP00000021588	Inositol polyphosphate phosphatase-like 1a.	Ras homolog gene family, member Gc.	0.420
W5MM02_LEPOC	RAC3	ENSLOCP00000009411	ENSLOCP00000015230	Inositol polyphosphate phosphatase-like 1a.	Rac family small GTPase 3.	0.424
W5MM02_LEPOC	rac1	ENSLOCP00000009411	ENSLOCP00000010207	Inositol polyphosphate phosphatase-like 1a.	Rac family small GTPase 1b.	0.424
W5MM02_LEPOC	rhog	ENSLOCP00000009411	ENSLOCP00000022124	Inositol polyphosphate phosphatase-like 1a.	Ras homolog family member Gb.	0.420
gnb1	LOC102690743	ENSLOCP00000007434	ENSLOCP00000021588	Guanine nucleotide binding protein (G protein), beta polypeptide 1b.	Ras homolog gene family, member Gc.	0.528
gnb1	RAC3	ENSLOCP00000007434	ENSLOCP00000015230	Guanine nucleotide binding protein (G protein), beta polypeptide 1b.	Rac family small GTPase 3.	0.632
gnb1	rac1	ENSLOCP00000007434	ENSLOCP00000010207	Guanine nucleotide binding protein (G protein), beta polypeptide 1b.	Rac family small GTPase 1b.	0.632
gnb1	rhog	ENSLOCP00000007434	ENSLOCP00000022124	Guanine nucleotide binding protein (G protein), beta polypeptide 1b.	Ras homolog family member Gb.	0.528
rac1	LOC102690743	ENSLOCP00000010207	ENSLOCP00000021588	Rac family small GTPase 1b.	Ras homolog gene family, member Gc.	0.660
rac1	W5MM02_LEPOC	ENSLOCP00000010207	ENSLOCP00000009411	Rac family small GTPase 1b.	Inositol polyphosphate phosphatase-like 1a.	0.424
rac1	gnb1	ENSLOCP00000010207	ENSLOCP00000007434	Rac family small GTPase 1b.	Guanine nucleotide binding protein (G protein), beta polypeptide 1b.	0.632
rac1	rhog	ENSLOCP00000010207	ENSLOCP00000022124	Rac family small GTPase 1b.	Ras homolog family member Gb.	0.660