STRINGSTRING
cdc45 cdc45 gins1 gins1 W5NG96_LEPOC W5NG96_LEPOC mcm2 mcm2 LOC102695737 LOC102695737 rad51 rad51 LOC102697986 LOC102697986 W5MNK3_LEPOC W5MNK3_LEPOC mcm4 mcm4 gins3 gins3 pola1 pola1 W5M103_LEPOC W5M103_LEPOC mcm6 mcm6
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
cdc45CDC45 cell division cycle 45 homolog (S. cerevisiae). (570 aa)
gins1GINS complex subunit 1 (Psf1 homolog). (196 aa)
W5NG96_LEPOCDNA helicase; Belongs to the MCM family. (815 aa)
mcm2DNA helicase; Belongs to the MCM family. (887 aa)
LOC102695737DNA helicase; Belongs to the MCM family. (834 aa)
rad51DNA repair protein RAD51 homolog; Plays an important role in homologous strand exchange, a key step in DNA repair through homologous recombination. Binds to single and double-stranded DNA and exhibits DNA-dependent ATPase activity. Catalyzes the recognition of homology and strand exchange between homologous DNA partners to form a joint molecule between a processed DNA break and the repair template. Binds to single-stranded DNA in an ATP-dependent manner to form nucleoprotein filaments which are essential for the homology search and strand exchange. Belongs to the RecA family. RAD51 sub [...] (341 aa)
LOC102697986DNA helicase; Belongs to the MCM family. (814 aa)
W5MNK3_LEPOCTower domain-containing protein. (871 aa)
mcm4DNA helicase; Belongs to the MCM family. (678 aa)
gins3GINS complex subunit 3. (211 aa)
pola1DNA polymerase. (1486 aa)
W5M103_LEPOCDNA ligase. (1030 aa)
mcm6DNA helicase; Belongs to the MCM family. (819 aa)
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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