58 items (Lepisosteus oculatus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	dsel	Dermatan sulfate epimerase like a. (1216 aa)
	W5NDS9_LEPOC	Sulfotransferase; Belongs to the sulfotransferase 1 family. (429 aa)
	W5NEI6_LEPOC	Inter-alpha-trypsin inhibitor heavy chain family member 6. (1304 aa)
	W5NF86_LEPOC	Inter-alpha-trypsin inhibitor heavy chain 5. (988 aa)
	chst11	Carbohydrate sulfotransferase. (351 aa)
	itih2	Inter-alpha-trypsin inhibitor heavy chain 2. (954 aa)
	SPAM1	Hyaluronidase. (457 aa)
	LOC102693624	Hyaluronidase. (443 aa)
	W5NFW7_LEPOC	Hyaluronidase. (448 aa)
	LOC102694223	Hyaluronidase. (491 aa)
	LOC102683252	Decorin; May affect the rate of fibrils formation. (359 aa)
	dse	Dermatan sulfate epimerase. (965 aa)
	chst1	Sulfotransferase; Belongs to the sulfotransferase 1 family. (420 aa)
	chst7	Sulfotransferase; Belongs to the sulfotransferase 1 family. (417 aa)
	chst12	Carbohydrate sulfotransferase. (435 aa)
	LOC102691410	G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family. (435 aa)
	W5NB33_LEPOC	Inter-alpha-trypsin inhibitor heavy chain 3b. (616 aa)
	W5NB30_LEPOC	Inter-alpha-trypsin inhibitor heavy chain 1. (872 aa)
	W5NAU8_LEPOC	Hyaluronidase. (250 aa)
	W5NAC3_LEPOC	Hyaluronidase. (429 aa)
	W5NA62_LEPOC	Hyaluronidase. (468 aa)
	hyal1	Hyaluronidase. (446 aa)
	W5N9Y4_LEPOC	Transforming growth factor beta; Belongs to the TGF-beta family. (392 aa)
	chsy1	Hexosyltransferase. (801 aa)
	glce	Glucuronic acid epimerase a. (625 aa)
	chst13	Carbohydrate sulfotransferase. (342 aa)
	ugdh	UDP-glucose 6-dehydrogenase; Involved in the biosynthesis of glycosaminoglycans; hyaluronan, chondroitin sulfate, and heparan sulfate. Belongs to the UDP-glucose/GDP-mannose dehydrogenase family. (490 aa)
	ndst2	N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 2a. (893 aa)
	cemip	Cell migration inducing hyaluronidase 1. (1361 aa)
	LOC102694927	G8 domain-containing protein. (1277 aa)
	EGFLAM	EGF like, fibronectin type III and laminin G domains. (1033 aa)
	W5N330_LEPOC	Iduronidase alpha-L-. (641 aa)
	csgalnact2	Hexosyltransferase. (540 aa)
	LOC102697883	UDP-glucose 6-dehydrogenase; Involved in the biosynthesis of glycosaminoglycans; hyaluronan, chondroitin sulfate, and heparan sulfate. Belongs to the UDP-glucose/GDP-mannose dehydrogenase family. (495 aa)
	W5MZ48_LEPOC	Xylosyltransferase II. (771 aa)
	ndst1	N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 1a. (878 aa)
	csgalnact1	Hexosyltransferase. (537 aa)
	ndnf	Neuron-derived neurotrophic factor. (571 aa)
	cemip2	Cell migration inducing hyaluronidase 2. (1382 aa)
	mamdc2	MAM domain containing 2a. (681 aa)
	has2	Hyaluronan synthase 2. (552 aa)
	chpf2	Hexosyltransferase. (767 aa)
	uxs1	UDP-glucuronate decarboxylase 1. (420 aa)
	ednra	Endothelin receptor type Aa; Belongs to the G-protein coupled receptor 1 family. (433 aa)
	LOC102697612	Neuron-derived neurotrophic factor, like. (556 aa)
	chsy3	Hexosyltransferase. (822 aa)
	xylt1	Xylosyltransferase I. (938 aa)
	chst3	Sulfotransferase; Belongs to the sulfotransferase 1 family. (461 aa)
	LOC102695491	Endothelin receptor type Bb; Belongs to the G-protein coupled receptor 1 family. (444 aa)
	LOC102689623	Hexosyltransferase. (783 aa)
	spock2	SPARC (osteonectin), cwcv and kazal like domains proteoglycan 2. (418 aa)
	hs2st1	Heparan sulfate 2-O-sulfotransferase 1b. (368 aa)
	W5M9D5_LEPOC	Hyaluronan synthase 1. (544 aa)
	LOC102694992	N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3. (873 aa)
	ext2	Exostosin glycosyltransferase 2; Belongs to the glycosyltransferase 47 family. (730 aa)
	tnfaip6	Tumor necrosis factor, alpha-induced protein 6. (261 aa)
	has3	Hyaluronan synthase 3. (547 aa)
	W5M0L9_LEPOC	Uncharacterized protein. (302 aa)

Your Current Organism:

Lepisosteus oculatus

NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
EGFLAM	hs2st1	ENSLOCP00000015567	ENSLOCP00000006182	EGF like, fibronectin type III and laminin G domains.	Heparan sulfate 2-O-sulfotransferase 1b.	0.546
EGFLAM	mamdc2	ENSLOCP00000015567	ENSLOCP00000011588	EGF like, fibronectin type III and laminin G domains.	MAM domain containing 2a.	0.400
LOC102683252	LOC102689623	ENSLOCP00000020241	ENSLOCP00000006428	Decorin; May affect the rate of fibrils formation.	Hexosyltransferase.	0.503
LOC102683252	W5MZ48_LEPOC	ENSLOCP00000020241	ENSLOCP00000013657	Decorin; May affect the rate of fibrils formation.	Xylosyltransferase II.	0.537
LOC102683252	W5N9Y4_LEPOC	ENSLOCP00000020241	ENSLOCP00000017443	Decorin; May affect the rate of fibrils formation.	Transforming growth factor beta; Belongs to the TGF-beta family.	0.959
LOC102683252	chpf2	ENSLOCP00000020241	ENSLOCP00000011039	Decorin; May affect the rate of fibrils formation.	Hexosyltransferase.	0.503
LOC102683252	chst11	ENSLOCP00000020241	ENSLOCP00000018512	Decorin; May affect the rate of fibrils formation.	Carbohydrate sulfotransferase.	0.593
LOC102683252	chst12	ENSLOCP00000020241	ENSLOCP00000022202	Decorin; May affect the rate of fibrils formation.	Carbohydrate sulfotransferase.	0.678
LOC102683252	chsy1	ENSLOCP00000020241	ENSLOCP00000017346	Decorin; May affect the rate of fibrils formation.	Hexosyltransferase.	0.587
LOC102683252	chsy3	ENSLOCP00000020241	ENSLOCP00000010065	Decorin; May affect the rate of fibrils formation.	Hexosyltransferase.	0.579
LOC102683252	csgalnact1	ENSLOCP00000020241	ENSLOCP00000012500	Decorin; May affect the rate of fibrils formation.	Hexosyltransferase.	0.485
LOC102683252	csgalnact2	ENSLOCP00000020241	ENSLOCP00000014122	Decorin; May affect the rate of fibrils formation.	Hexosyltransferase.	0.485
LOC102683252	dse	ENSLOCP00000020241	ENSLOCP00000020975	Decorin; May affect the rate of fibrils formation.	Dermatan sulfate epimerase.	0.625
LOC102683252	xylt1	ENSLOCP00000020241	ENSLOCP00000008483	Decorin; May affect the rate of fibrils formation.	Xylosyltransferase I.	0.561
LOC102689623	LOC102683252	ENSLOCP00000006428	ENSLOCP00000020241	Hexosyltransferase.	Decorin; May affect the rate of fibrils formation.	0.503
LOC102689623	chpf2	ENSLOCP00000006428	ENSLOCP00000011039	Hexosyltransferase.	Hexosyltransferase.	0.858
LOC102689623	chsy1	ENSLOCP00000006428	ENSLOCP00000017346	Hexosyltransferase.	Hexosyltransferase.	0.909
LOC102689623	chsy3	ENSLOCP00000006428	ENSLOCP00000010065	Hexosyltransferase.	Hexosyltransferase.	0.909
LOC102689623	csgalnact1	ENSLOCP00000006428	ENSLOCP00000012500	Hexosyltransferase.	Hexosyltransferase.	0.897
LOC102689623	csgalnact2	ENSLOCP00000006428	ENSLOCP00000014122	Hexosyltransferase.	Hexosyltransferase.	0.897