8 items (Lepisosteus oculatus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	bbs2	Bardet-Biedl syndrome 2 protein homolog. (717 aa)
	bbs9	Bardet-Biedl syndrome 9. (960 aa)
	W5M3R4_LEPOC	Bardet-Biedl syndrome 1. (507 aa)
	bbs7	Bardet-Biedl syndrome 7 protein homolog; The BBSome complex is thought to function as a coat complex required for sorting of specific membrane proteins to the primary cilia. The BBSome complex is required for ciliogenesis but is dispensable for centriolar satellite function. (718 aa)
	bbs5	Bardet-Biedl syndrome 5 protein homolog; Required for ciliogenesis; Belongs to the BBS5 family. (342 aa)
	W5MWM9_LEPOC	Tetratricopeptide repeat domain 8. (477 aa)
	W5N3D2_LEPOC	BBSome interacting protein 1. (72 aa)
	BBS10	Bardet-Biedl syndrome 10. (724 aa)

Your Current Organism:

Lepisosteus oculatus

NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BBS10	W5M3R4_LEPOC	ENSLOCP00000020072	ENSLOCP00000003022	Bardet-Biedl syndrome 10.	Bardet-Biedl syndrome 1.	0.618
BBS10	W5MWM9_LEPOC	ENSLOCP00000020072	ENSLOCP00000012788	Bardet-Biedl syndrome 10.	Tetratricopeptide repeat domain 8.	0.579
BBS10	W5N3D2_LEPOC	ENSLOCP00000020072	ENSLOCP00000015141	Bardet-Biedl syndrome 10.	BBSome interacting protein 1.	0.426
BBS10	bbs2	ENSLOCP00000020072	ENSLOCP00000009574	Bardet-Biedl syndrome 10.	Bardet-Biedl syndrome 2 protein homolog.	0.677
BBS10	bbs5	ENSLOCP00000020072	ENSLOCP00000009778	Bardet-Biedl syndrome 10.	Bardet-Biedl syndrome 5 protein homolog; Required for ciliogenesis; Belongs to the BBS5 family.	0.573
BBS10	bbs7	ENSLOCP00000020072	ENSLOCP00000003489	Bardet-Biedl syndrome 10.	Bardet-Biedl syndrome 7 protein homolog; The BBSome complex is thought to function as a coat complex required for sorting of specific membrane proteins to the primary cilia. The BBSome complex is required for ciliogenesis but is dispensable for centriolar satellite function.	0.726
BBS10	bbs9	ENSLOCP00000020072	ENSLOCP00000003012	Bardet-Biedl syndrome 10.	Bardet-Biedl syndrome 9.	0.672
W5M3R4_LEPOC	BBS10	ENSLOCP00000003022	ENSLOCP00000020072	Bardet-Biedl syndrome 1.	Bardet-Biedl syndrome 10.	0.618
W5M3R4_LEPOC	W5MWM9_LEPOC	ENSLOCP00000003022	ENSLOCP00000012788	Bardet-Biedl syndrome 1.	Tetratricopeptide repeat domain 8.	0.996
W5M3R4_LEPOC	W5N3D2_LEPOC	ENSLOCP00000003022	ENSLOCP00000015141	Bardet-Biedl syndrome 1.	BBSome interacting protein 1.	0.923
W5M3R4_LEPOC	bbs2	ENSLOCP00000003022	ENSLOCP00000009574	Bardet-Biedl syndrome 1.	Bardet-Biedl syndrome 2 protein homolog.	0.996
W5M3R4_LEPOC	bbs5	ENSLOCP00000003022	ENSLOCP00000009778	Bardet-Biedl syndrome 1.	Bardet-Biedl syndrome 5 protein homolog; Required for ciliogenesis; Belongs to the BBS5 family.	0.986
W5M3R4_LEPOC	bbs7	ENSLOCP00000003022	ENSLOCP00000003489	Bardet-Biedl syndrome 1.	Bardet-Biedl syndrome 7 protein homolog; The BBSome complex is thought to function as a coat complex required for sorting of specific membrane proteins to the primary cilia. The BBSome complex is required for ciliogenesis but is dispensable for centriolar satellite function.	0.995
W5M3R4_LEPOC	bbs9	ENSLOCP00000003022	ENSLOCP00000003012	Bardet-Biedl syndrome 1.	Bardet-Biedl syndrome 9.	0.996
W5MWM9_LEPOC	BBS10	ENSLOCP00000012788	ENSLOCP00000020072	Tetratricopeptide repeat domain 8.	Bardet-Biedl syndrome 10.	0.579
W5MWM9_LEPOC	W5M3R4_LEPOC	ENSLOCP00000012788	ENSLOCP00000003022	Tetratricopeptide repeat domain 8.	Bardet-Biedl syndrome 1.	0.996
W5MWM9_LEPOC	W5N3D2_LEPOC	ENSLOCP00000012788	ENSLOCP00000015141	Tetratricopeptide repeat domain 8.	BBSome interacting protein 1.	0.954
W5MWM9_LEPOC	bbs2	ENSLOCP00000012788	ENSLOCP00000009574	Tetratricopeptide repeat domain 8.	Bardet-Biedl syndrome 2 protein homolog.	0.996
W5MWM9_LEPOC	bbs5	ENSLOCP00000012788	ENSLOCP00000009778	Tetratricopeptide repeat domain 8.	Bardet-Biedl syndrome 5 protein homolog; Required for ciliogenesis; Belongs to the BBS5 family.	0.985
W5MWM9_LEPOC	bbs7	ENSLOCP00000012788	ENSLOCP00000003489	Tetratricopeptide repeat domain 8.	Bardet-Biedl syndrome 7 protein homolog; The BBSome complex is thought to function as a coat complex required for sorting of specific membrane proteins to the primary cilia. The BBSome complex is required for ciliogenesis but is dispensable for centriolar satellite function.	0.995