9 items (Lepisosteus oculatus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	W5N963_LEPOC	Uncharacterized protein. (205 aa)
	W5LVJ9_LEPOC	ATP-dependent DNA helicase; Belongs to the helicase family. (461 aa)
	W5M3C4_LEPOC	ATP-dependent DNA helicase; Belongs to the helicase family. (333 aa)
	W5M5Q6_LEPOC	Uncharacterized protein. (209 aa)
	W5LVL5_LEPOC	ATP-dependent DNA helicase; Belongs to the helicase family. (858 aa)
	W5LVS5_LEPOC	Uncharacterized protein. (134 aa)
	W5LW14_LEPOC	Helitron_like_N domain-containing protein. (390 aa)
	W5LWP3_LEPOC	Uncharacterized protein. (178 aa)
	W5LX14_LEPOC	ATP-dependent DNA helicase; Belongs to the helicase family. (792 aa)

Your Current Organism:

Lepisosteus oculatus

NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
W5LVJ9_LEPOC	W5LVS5_LEPOC	ENSLOCP00000000156	ENSLOCP00000000232	ATP-dependent DNA helicase; Belongs to the helicase family.	Uncharacterized protein.	0.507
W5LVJ9_LEPOC	W5M3C4_LEPOC	ENSLOCP00000000156	ENSLOCP00000002882	ATP-dependent DNA helicase; Belongs to the helicase family.	ATP-dependent DNA helicase; Belongs to the helicase family.	0.496
W5LVJ9_LEPOC	W5N963_LEPOC	ENSLOCP00000000156	ENSLOCP00000017172	ATP-dependent DNA helicase; Belongs to the helicase family.	Uncharacterized protein.	0.515
W5LVL5_LEPOC	W5LWP3_LEPOC	ENSLOCP00000000172	ENSLOCP00000000550	ATP-dependent DNA helicase; Belongs to the helicase family.	Uncharacterized protein.	0.527
W5LVL5_LEPOC	W5M5Q6_LEPOC	ENSLOCP00000000172	ENSLOCP00000003714	ATP-dependent DNA helicase; Belongs to the helicase family.	Uncharacterized protein.	0.479
W5LVS5_LEPOC	W5LVJ9_LEPOC	ENSLOCP00000000232	ENSLOCP00000000156	Uncharacterized protein.	ATP-dependent DNA helicase; Belongs to the helicase family.	0.507
W5LVS5_LEPOC	W5LW14_LEPOC	ENSLOCP00000000232	ENSLOCP00000000321	Uncharacterized protein.	Helitron_like_N domain-containing protein.	0.519
W5LVS5_LEPOC	W5LWP3_LEPOC	ENSLOCP00000000232	ENSLOCP00000000550	Uncharacterized protein.	Uncharacterized protein.	0.467
W5LVS5_LEPOC	W5M3C4_LEPOC	ENSLOCP00000000232	ENSLOCP00000002882	Uncharacterized protein.	ATP-dependent DNA helicase; Belongs to the helicase family.	0.528
W5LW14_LEPOC	W5LVS5_LEPOC	ENSLOCP00000000321	ENSLOCP00000000232	Helitron_like_N domain-containing protein.	Uncharacterized protein.	0.519
W5LW14_LEPOC	W5M3C4_LEPOC	ENSLOCP00000000321	ENSLOCP00000002882	Helitron_like_N domain-containing protein.	ATP-dependent DNA helicase; Belongs to the helicase family.	0.534
W5LW14_LEPOC	W5N963_LEPOC	ENSLOCP00000000321	ENSLOCP00000017172	Helitron_like_N domain-containing protein.	Uncharacterized protein.	0.557
W5LWP3_LEPOC	W5LVL5_LEPOC	ENSLOCP00000000550	ENSLOCP00000000172	Uncharacterized protein.	ATP-dependent DNA helicase; Belongs to the helicase family.	0.527
W5LWP3_LEPOC	W5LVS5_LEPOC	ENSLOCP00000000550	ENSLOCP00000000232	Uncharacterized protein.	Uncharacterized protein.	0.467
W5LWP3_LEPOC	W5M3C4_LEPOC	ENSLOCP00000000550	ENSLOCP00000002882	Uncharacterized protein.	ATP-dependent DNA helicase; Belongs to the helicase family.	0.487
W5LWP3_LEPOC	W5N963_LEPOC	ENSLOCP00000000550	ENSLOCP00000017172	Uncharacterized protein.	Uncharacterized protein.	0.520
W5M3C4_LEPOC	W5LVJ9_LEPOC	ENSLOCP00000002882	ENSLOCP00000000156	ATP-dependent DNA helicase; Belongs to the helicase family.	ATP-dependent DNA helicase; Belongs to the helicase family.	0.496
W5M3C4_LEPOC	W5LVS5_LEPOC	ENSLOCP00000002882	ENSLOCP00000000232	ATP-dependent DNA helicase; Belongs to the helicase family.	Uncharacterized protein.	0.528
W5M3C4_LEPOC	W5LW14_LEPOC	ENSLOCP00000002882	ENSLOCP00000000321	ATP-dependent DNA helicase; Belongs to the helicase family.	Helitron_like_N domain-containing protein.	0.534
W5M3C4_LEPOC	W5LWP3_LEPOC	ENSLOCP00000002882	ENSLOCP00000000550	ATP-dependent DNA helicase; Belongs to the helicase family.	Uncharacterized protein.	0.487