30 items (Lepisosteus oculatus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC107076005	Uncharacterized protein. (424 aa)
	W5LVT1_LEPOC	Ig-like domain-containing protein. (352 aa)
	W5LWA2_LEPOC	Ig-like domain-containing protein; Belongs to the MHC class I family. (345 aa)
	W5LWC2_LEPOC	Ig-like domain-containing protein. (243 aa)
	LOC102699190	Ig-like domain-containing protein. (370 aa)
	W5LWJ7_LEPOC	Ig-like domain-containing protein. (126 aa)
	W5LWT9_LEPOC	Uncharacterized protein. (607 aa)
	W5LXE9_LEPOC	Uncharacterized protein. (266 aa)
	W5LXH9_LEPOC	Uncharacterized protein. (246 aa)
	W5LXI5_LEPOC	Ig-like domain-containing protein. (137 aa)
	W5LXP7_LEPOC	Ig-like domain-containing protein; Belongs to the MHC class I family. (279 aa)
	W5LXQ5_LEPOC	Beta-2-microglobulin; Component of the class I major histocompatibility complex (MHC). Involved in the presentation of peptide antigens to the immune system. (385 aa)
	W5LXT3_LEPOC	Uncharacterized protein. (581 aa)
	W5LZ11_LEPOC	Neuronal cell adhesion molecule a. (1337 aa)
	W5LZS3_LEPOC	Uncharacterized protein. (482 aa)
	W5M039_LEPOC	Uncharacterized protein. (249 aa)
	W5M250_LEPOC	Uncharacterized protein. (616 aa)
	LOC107075612	Uncharacterized protein. (513 aa)
	W5M5N4_LEPOC	Uncharacterized protein. (329 aa)
	W5M9Q9_LEPOC	Si:ch211-79k12.1. (321 aa)
	LOC107076675	Ig-like domain-containing protein. (322 aa)
	alcam	Activated leukocyte cell adhesion molecule a. (578 aa)
	W5MIR7_LEPOC	TAP binding protein like. (441 aa)
	W5MK52_LEPOC	Ig-like domain-containing protein; Belongs to the MHC class I family. (327 aa)
	LOC102682210	Ig-like domain-containing protein. (254 aa)
	W5MKC8_LEPOC	Zgc:123107. (210 aa)
	LOC102682616	Ig-like domain-containing protein. (140 aa)
	W5MRE2_LEPOC	Cell adhesion molecule 2a. (364 aa)
	acan	Aggrecan b. (1313 aa)
	W5NNW9_LEPOC	Beta-2-microglobulin; Component of the class I major histocompatibility complex (MHC). Involved in the presentation of peptide antigens to the immune system. (93 aa)

Your Current Organism:

Lepisosteus oculatus

NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC102682210	LOC102682616	ENSLOCP00000008780	ENSLOCP00000008849	Ig-like domain-containing protein.	Ig-like domain-containing protein.	0.557
LOC102682210	W5LWC2_LEPOC	ENSLOCP00000008780	ENSLOCP00000000429	Ig-like domain-containing protein.	Ig-like domain-containing protein.	0.567
LOC102682210	W5LXQ5_LEPOC	ENSLOCP00000008780	ENSLOCP00000000912	Ig-like domain-containing protein.	Beta-2-microglobulin; Component of the class I major histocompatibility complex (MHC). Involved in the presentation of peptide antigens to the immune system.	0.540
LOC102682210	W5MKC8_LEPOC	ENSLOCP00000008780	ENSLOCP00000008837	Ig-like domain-containing protein.	Zgc:123107.	0.565
LOC102682210	W5NNW9_LEPOC	ENSLOCP00000008780	ENSLOCP00000022328	Ig-like domain-containing protein.	Beta-2-microglobulin; Component of the class I major histocompatibility complex (MHC). Involved in the presentation of peptide antigens to the immune system.	0.540
LOC102682616	LOC102682210	ENSLOCP00000008849	ENSLOCP00000008780	Ig-like domain-containing protein.	Ig-like domain-containing protein.	0.557
LOC102682616	W5LWC2_LEPOC	ENSLOCP00000008849	ENSLOCP00000000429	Ig-like domain-containing protein.	Ig-like domain-containing protein.	0.551
LOC102682616	W5LXQ5_LEPOC	ENSLOCP00000008849	ENSLOCP00000000912	Ig-like domain-containing protein.	Beta-2-microglobulin; Component of the class I major histocompatibility complex (MHC). Involved in the presentation of peptide antigens to the immune system.	0.637
LOC102682616	W5MKC8_LEPOC	ENSLOCP00000008849	ENSLOCP00000008837	Ig-like domain-containing protein.	Zgc:123107.	0.561
LOC102682616	W5NNW9_LEPOC	ENSLOCP00000008849	ENSLOCP00000022328	Ig-like domain-containing protein.	Beta-2-microglobulin; Component of the class I major histocompatibility complex (MHC). Involved in the presentation of peptide antigens to the immune system.	0.581
LOC102699190	W5NNW9_LEPOC	ENSLOCP00000000460	ENSLOCP00000022328	Ig-like domain-containing protein.	Beta-2-microglobulin; Component of the class I major histocompatibility complex (MHC). Involved in the presentation of peptide antigens to the immune system.	0.517
W5LVT1_LEPOC	W5LXP7_LEPOC	ENSLOCP00000000238	ENSLOCP00000000904	Ig-like domain-containing protein.	Ig-like domain-containing protein; Belongs to the MHC class I family.	0.474
W5LVT1_LEPOC	W5MK52_LEPOC	ENSLOCP00000000238	ENSLOCP00000008761	Ig-like domain-containing protein.	Ig-like domain-containing protein; Belongs to the MHC class I family.	0.466
W5LVT1_LEPOC	W5NNW9_LEPOC	ENSLOCP00000000238	ENSLOCP00000022328	Ig-like domain-containing protein.	Beta-2-microglobulin; Component of the class I major histocompatibility complex (MHC). Involved in the presentation of peptide antigens to the immune system.	0.762
W5LWA2_LEPOC	W5NNW9_LEPOC	ENSLOCP00000000409	ENSLOCP00000022328	Ig-like domain-containing protein; Belongs to the MHC class I family.	Beta-2-microglobulin; Component of the class I major histocompatibility complex (MHC). Involved in the presentation of peptide antigens to the immune system.	0.517
W5LWC2_LEPOC	LOC102682210	ENSLOCP00000000429	ENSLOCP00000008780	Ig-like domain-containing protein.	Ig-like domain-containing protein.	0.567
W5LWC2_LEPOC	LOC102682616	ENSLOCP00000000429	ENSLOCP00000008849	Ig-like domain-containing protein.	Ig-like domain-containing protein.	0.551
W5LWC2_LEPOC	W5LXQ5_LEPOC	ENSLOCP00000000429	ENSLOCP00000000912	Ig-like domain-containing protein.	Beta-2-microglobulin; Component of the class I major histocompatibility complex (MHC). Involved in the presentation of peptide antigens to the immune system.	0.637
W5LWC2_LEPOC	W5MKC8_LEPOC	ENSLOCP00000000429	ENSLOCP00000008837	Ig-like domain-containing protein.	Zgc:123107.	0.566
W5LWC2_LEPOC	W5NNW9_LEPOC	ENSLOCP00000000429	ENSLOCP00000022328	Ig-like domain-containing protein.	Beta-2-microglobulin; Component of the class I major histocompatibility complex (MHC). Involved in the presentation of peptide antigens to the immune system.	0.570