(3 nodes) Alanine racemase/group IV decarboxylase, C-terminal network (Lepisosteus oculatus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	odc1	Ornithine decarboxylase 1; Belongs to the Orn/Lys/Arg decarboxylase class-II family. (466 aa)
	W5LYT6_LEPOC	Uncharacterized protein; Belongs to the Orn/Lys/Arg decarboxylase class-II family. (261 aa)
	azin1	Antizyme inhibitor 1b; Belongs to the Orn/Lys/Arg decarboxylase class-II family. (449 aa)

Your Current Organism:

Lepisosteus oculatus

NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
W5LYT6_LEPOC	azin1	ENSLOCP00000001293	ENSLOCP00000012140	Uncharacterized protein; Belongs to the Orn/Lys/Arg decarboxylase class-II family.	Antizyme inhibitor 1b; Belongs to the Orn/Lys/Arg decarboxylase class-II family.	0.641
azin1	W5LYT6_LEPOC	ENSLOCP00000012140	ENSLOCP00000001293	Antizyme inhibitor 1b; Belongs to the Orn/Lys/Arg decarboxylase class-II family.	Uncharacterized protein; Belongs to the Orn/Lys/Arg decarboxylase class-II family.	0.641
azin1	odc1	ENSLOCP00000012140	ENSLOCP00000020578	Antizyme inhibitor 1b; Belongs to the Orn/Lys/Arg decarboxylase class-II family.	Ornithine decarboxylase 1; Belongs to the Orn/Lys/Arg decarboxylase class-II family.	0.632
odc1	azin1	ENSLOCP00000020578	ENSLOCP00000012140	Ornithine decarboxylase 1; Belongs to the Orn/Lys/Arg decarboxylase class-II family.	Antizyme inhibitor 1b; Belongs to the Orn/Lys/Arg decarboxylase class-II family.	0.632