(6 nodes) Ubiquitin conserved site network (Lepisosteus oculatus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	usp14	Ubiquitin carboxyl-terminal hydrolase. (497 aa)
	uba52	Ubiquitin A-52 residue ribosomal protein fusion product 1. (153 aa)
	W5M921_LEPOC	Ubiquitin family domain containing 1. (289 aa)
	rps27a	Ribosomal protein S27a. (162 aa)
	ubl4a	Ubiquitin-like domain-containing protein. (149 aa)
	W5NNN6_LEPOC	ISG15 ubiquitin like modifier. (158 aa)

Your Current Organism:

Lepisosteus oculatus

NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
W5M921_LEPOC	W5NNN6_LEPOC	ENSLOCP00000004880	ENSLOCP00000022245	Ubiquitin family domain containing 1.	ISG15 ubiquitin like modifier.	0.735
W5M921_LEPOC	rps27a	ENSLOCP00000004880	ENSLOCP00000019146	Ubiquitin family domain containing 1.	Ribosomal protein S27a.	0.911
W5M921_LEPOC	uba52	ENSLOCP00000004880	ENSLOCP00000002515	Ubiquitin family domain containing 1.	Ubiquitin A-52 residue ribosomal protein fusion product 1.	0.820
W5M921_LEPOC	ubl4a	ENSLOCP00000004880	ENSLOCP00000019180	Ubiquitin family domain containing 1.	Ubiquitin-like domain-containing protein.	0.735
W5NNN6_LEPOC	W5M921_LEPOC	ENSLOCP00000022245	ENSLOCP00000004880	ISG15 ubiquitin like modifier.	Ubiquitin family domain containing 1.	0.735
W5NNN6_LEPOC	rps27a	ENSLOCP00000022245	ENSLOCP00000019146	ISG15 ubiquitin like modifier.	Ribosomal protein S27a.	0.917
W5NNN6_LEPOC	uba52	ENSLOCP00000022245	ENSLOCP00000002515	ISG15 ubiquitin like modifier.	Ubiquitin A-52 residue ribosomal protein fusion product 1.	0.879
W5NNN6_LEPOC	usp14	ENSLOCP00000022245	ENSLOCP00000002419	ISG15 ubiquitin like modifier.	Ubiquitin carboxyl-terminal hydrolase.	0.735
rps27a	W5M921_LEPOC	ENSLOCP00000019146	ENSLOCP00000004880	Ribosomal protein S27a.	Ubiquitin family domain containing 1.	0.911
rps27a	W5NNN6_LEPOC	ENSLOCP00000019146	ENSLOCP00000022245	Ribosomal protein S27a.	ISG15 ubiquitin like modifier.	0.917
rps27a	uba52	ENSLOCP00000019146	ENSLOCP00000002515	Ribosomal protein S27a.	Ubiquitin A-52 residue ribosomal protein fusion product 1.	0.999
rps27a	ubl4a	ENSLOCP00000019146	ENSLOCP00000019180	Ribosomal protein S27a.	Ubiquitin-like domain-containing protein.	0.910
rps27a	usp14	ENSLOCP00000019146	ENSLOCP00000002419	Ribosomal protein S27a.	Ubiquitin carboxyl-terminal hydrolase.	0.980
uba52	W5M921_LEPOC	ENSLOCP00000002515	ENSLOCP00000004880	Ubiquitin A-52 residue ribosomal protein fusion product 1.	Ubiquitin family domain containing 1.	0.820
uba52	W5NNN6_LEPOC	ENSLOCP00000002515	ENSLOCP00000022245	Ubiquitin A-52 residue ribosomal protein fusion product 1.	ISG15 ubiquitin like modifier.	0.879
uba52	rps27a	ENSLOCP00000002515	ENSLOCP00000019146	Ubiquitin A-52 residue ribosomal protein fusion product 1.	Ribosomal protein S27a.	0.999
uba52	ubl4a	ENSLOCP00000002515	ENSLOCP00000019180	Ubiquitin A-52 residue ribosomal protein fusion product 1.	Ubiquitin-like domain-containing protein.	0.869
uba52	usp14	ENSLOCP00000002515	ENSLOCP00000002419	Ubiquitin A-52 residue ribosomal protein fusion product 1.	Ubiquitin carboxyl-terminal hydrolase.	0.979
ubl4a	W5M921_LEPOC	ENSLOCP00000019180	ENSLOCP00000004880	Ubiquitin-like domain-containing protein.	Ubiquitin family domain containing 1.	0.735
ubl4a	rps27a	ENSLOCP00000019180	ENSLOCP00000019146	Ubiquitin-like domain-containing protein.	Ribosomal protein S27a.	0.910