(39 nodes) Bromodomain-like superfamily network (Lepisosteus oculatus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	brd9	Bromodomain containing 9. (687 aa)
	KIAA2026	Bromo domain-containing protein. (1897 aa)
	trim33	Tripartite motif containing 33. (1113 aa)
	W5MX36_LEPOC	Polybromo 1, like. (1682 aa)
	W5MZ00_LEPOC	Bromodomain and PHD finger containing, 3a. (1204 aa)
	W5N0E4_LEPOC	Uncharacterized protein. (181 aa)
	SMARCA2	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2. (1600 aa)
	W5N0P4_LEPOC	E1A binding protein p300 a. (2068 aa)
	W5N196_LEPOC	Uncharacterized protein. (365 aa)
	W5N1A6_LEPOC	Uncharacterized protein. (605 aa)
	zmynd11	Zinc finger, MYND-type containing 11. (626 aa)
	W5N4C5_LEPOC	Histone acetyltransferase; Belongs to the acetyltransferase family. GCN5 subfamily. (782 aa)
	W5N7Y2_LEPOC	Bromodomain PHD finger transcription factor. (3079 aa)
	W5NB67_LEPOC	Uncharacterized protein. (970 aa)
	taf1	Transcription initiation factor TFIID subunit. (1966 aa)
	W5LY98_LEPOC	Bromodomain adjacent to zinc finger domain, 1B. (1632 aa)
	W5M0F5_LEPOC	Bromodomain and WD repeat domain containing 1. (2247 aa)
	crebbp	CREB binding protein b. (2500 aa)
	trim66	Tripartite motif containing 66. (1196 aa)
	W5M8L3_LEPOC	Zinc finger, MYND-type containing 8. (1113 aa)
	W5M8W3_LEPOC	Lysine (K)-specific methyltransferase 2Ba. (2356 aa)
	KMT2A	Histone-lysine N-methyltransferase; Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. TRX/MLL subfamily. (4385 aa)
	W5MAB8_LEPOC	Bromo domain-containing protein. (504 aa)
	BRD3	Bromodomain containing 3. (743 aa)
	W5MBS5_LEPOC	Uncharacterized protein. (1095 aa)
	baz2b	Bromodomain adjacent to zinc finger domain, 2Ba. (2218 aa)
	W5NCX2_LEPOC	Bromodomain and WD repeat domain containing 3. (1767 aa)
	brd1	Bromodomain containing 1a. (1182 aa)
	phip	Pleckstrin homology domain interacting protein. (1832 aa)
	atad2b	ATPase family AAA domain containing 2B. (1432 aa)
	LOC102690816	Tripartite motif containing 24. (955 aa)
	kat2b	Histone acetyltransferase; Belongs to the acetyltransferase family. GCN5 subfamily. (796 aa)
	brd4	Bromodomain containing 4. (1547 aa)
	W5MKB1_LEPOC	Bromodomain adjacent to zinc finger domain, 2A. (1914 aa)
	W5MKK7_LEPOC	Bromodomain containing 7. (693 aa)
	smarca4	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4a. (1603 aa)
	atad2	Bromo domain-containing protein. (1349 aa)
	BAZ1A	Bromodomain adjacent to zinc finger domain 1A. (1505 aa)
	W5MTP9_LEPOC	Bromodomain containing 8. (859 aa)

Your Current Organism:

Lepisosteus oculatus

NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BAZ1A	SMARCA2	ENSLOCP00000011546	ENSLOCP00000014138	Bromodomain adjacent to zinc finger domain 1A.	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2.	0.406
BAZ1A	W5LY98_LEPOC	ENSLOCP00000011546	ENSLOCP00000001105	Bromodomain adjacent to zinc finger domain 1A.	Bromodomain adjacent to zinc finger domain, 1B.	0.427
BAZ1A	W5MAB8_LEPOC	ENSLOCP00000011546	ENSLOCP00000005327	Bromodomain adjacent to zinc finger domain 1A.	Bromo domain-containing protein.	0.695
BAZ1A	W5N4C5_LEPOC	ENSLOCP00000011546	ENSLOCP00000015484	Bromodomain adjacent to zinc finger domain 1A.	Histone acetyltransferase; Belongs to the acetyltransferase family. GCN5 subfamily.	0.437
BAZ1A	W5N7Y2_LEPOC	ENSLOCP00000011546	ENSLOCP00000016741	Bromodomain adjacent to zinc finger domain 1A.	Bromodomain PHD finger transcription factor.	0.605
BAZ1A	kat2b	ENSLOCP00000011546	ENSLOCP00000008022	Bromodomain adjacent to zinc finger domain 1A.	Histone acetyltransferase; Belongs to the acetyltransferase family. GCN5 subfamily.	0.437
BAZ1A	smarca4	ENSLOCP00000011546	ENSLOCP00000009505	Bromodomain adjacent to zinc finger domain 1A.	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4a.	0.406
BRD3	SMARCA2	ENSLOCP00000005430	ENSLOCP00000014138	Bromodomain containing 3.	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2.	0.415
BRD3	W5N0P4_LEPOC	ENSLOCP00000005430	ENSLOCP00000014203	Bromodomain containing 3.	E1A binding protein p300 a.	0.628
BRD3	brd9	ENSLOCP00000005430	ENSLOCP00000009850	Bromodomain containing 3.	Bromodomain containing 9.	0.412
BRD3	crebbp	ENSLOCP00000005430	ENSLOCP00000003190	Bromodomain containing 3.	CREB binding protein b.	0.551
BRD3	smarca4	ENSLOCP00000005430	ENSLOCP00000009505	Bromodomain containing 3.	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4a.	0.415
BRD3	taf1	ENSLOCP00000005430	ENSLOCP00000018291	Bromodomain containing 3.	Transcription initiation factor TFIID subunit.	0.707
KMT2A	W5MAB8_LEPOC	ENSLOCP00000004893	ENSLOCP00000005327	Histone-lysine N-methyltransferase; Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. TRX/MLL subfamily.	Bromo domain-containing protein.	0.466
KMT2A	W5N0P4_LEPOC	ENSLOCP00000004893	ENSLOCP00000014203	Histone-lysine N-methyltransferase; Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. TRX/MLL subfamily.	E1A binding protein p300 a.	0.905
KMT2A	W5N4C5_LEPOC	ENSLOCP00000004893	ENSLOCP00000015484	Histone-lysine N-methyltransferase; Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. TRX/MLL subfamily.	Histone acetyltransferase; Belongs to the acetyltransferase family. GCN5 subfamily.	0.645
KMT2A	crebbp	ENSLOCP00000004893	ENSLOCP00000003190	Histone-lysine N-methyltransferase; Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. TRX/MLL subfamily.	CREB binding protein b.	0.926
KMT2A	kat2b	ENSLOCP00000004893	ENSLOCP00000008022	Histone-lysine N-methyltransferase; Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. TRX/MLL subfamily.	Histone acetyltransferase; Belongs to the acetyltransferase family. GCN5 subfamily.	0.645
LOC102690816	W5NB67_LEPOC	ENSLOCP00000021032	ENSLOCP00000017876	Tripartite motif containing 24.	Uncharacterized protein.	0.401
SMARCA2	BAZ1A	ENSLOCP00000014138	ENSLOCP00000011546	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2.	Bromodomain adjacent to zinc finger domain 1A.	0.406