STRINGSTRING
ccn5 ccn5 LOC107079849 LOC107079849 W5M935_LEPOC W5M935_LEPOC ccn1 ccn1 W5MHL8_LEPOC W5MHL8_LEPOC W5MKH3_LEPOC W5MKH3_LEPOC CCN3 CCN3 ccn6 ccn6 ccn2 ccn2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ccn5Uncharacterized protein. (349 aa)
LOC107079849Cellular communication network factor 1, like 2. (376 aa)
W5M935_LEPOCCellular communication network factor 2b. (343 aa)
ccn1Cellular communication network factor 1. (377 aa)
W5MHL8_LEPOCSi:ch211-106h11.3. (212 aa)
W5MKH3_LEPOCCellular communication network factor 4a. (325 aa)
CCN3Cellular communication network factor 3. (351 aa)
ccn6Cellular communication network factor 6. (349 aa)
ccn2Cellular communication network factor 2a. (353 aa)
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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