9 items (Lepisosteus oculatus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	W5NKA3_LEPOC	Uncharacterized protein. (1215 aa)
	W5NKA2_LEPOC	Uncharacterized protein. (907 aa)
	rfng	Beta-1,3-N-acetylglucosaminyltransferase. (410 aa)
	LOC102690142	MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase. (344 aa)
	crb1	Crumbs cell polarity complex component 1. (1454 aa)
	LOC102693167	Beta-1,3-N-acetylglucosaminyltransferase. (386 aa)
	tmed2	Transmembrane p24 trafficking protein 2. (208 aa)
	W5MDC6_LEPOC	Crumbs cell polarity complex component 2b. (1450 aa)
	notch1	Notch receptor 1a. (2542 aa)

Your Current Organism:

Lepisosteus oculatus

NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC102690142	LOC102693167	ENSLOCP00000013844	ENSLOCP00000007365	MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase.	Beta-1,3-N-acetylglucosaminyltransferase.	0.859
LOC102690142	W5NKA2_LEPOC	ENSLOCP00000013844	ENSLOCP00000021061	MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase.	Uncharacterized protein.	0.603
LOC102690142	W5NKA3_LEPOC	ENSLOCP00000013844	ENSLOCP00000021062	MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase.	Uncharacterized protein.	0.603
LOC102690142	notch1	ENSLOCP00000013844	ENSLOCP00000004070	MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase.	Notch receptor 1a.	0.881
LOC102690142	rfng	ENSLOCP00000013844	ENSLOCP00000015217	MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase.	Beta-1,3-N-acetylglucosaminyltransferase.	0.861
LOC102693167	LOC102690142	ENSLOCP00000007365	ENSLOCP00000013844	Beta-1,3-N-acetylglucosaminyltransferase.	MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase.	0.859
LOC102693167	W5NKA2_LEPOC	ENSLOCP00000007365	ENSLOCP00000021061	Beta-1,3-N-acetylglucosaminyltransferase.	Uncharacterized protein.	0.603
LOC102693167	W5NKA3_LEPOC	ENSLOCP00000007365	ENSLOCP00000021062	Beta-1,3-N-acetylglucosaminyltransferase.	Uncharacterized protein.	0.603
LOC102693167	notch1	ENSLOCP00000007365	ENSLOCP00000004070	Beta-1,3-N-acetylglucosaminyltransferase.	Notch receptor 1a.	0.893
LOC102693167	rfng	ENSLOCP00000007365	ENSLOCP00000015217	Beta-1,3-N-acetylglucosaminyltransferase.	Beta-1,3-N-acetylglucosaminyltransferase.	0.860
W5MDC6_LEPOC	notch1	ENSLOCP00000006385	ENSLOCP00000004070	Crumbs cell polarity complex component 2b.	Notch receptor 1a.	0.488
W5MDC6_LEPOC	tmed2	ENSLOCP00000006385	ENSLOCP00000006993	Crumbs cell polarity complex component 2b.	Transmembrane p24 trafficking protein 2.	0.411
W5NKA2_LEPOC	LOC102690142	ENSLOCP00000021061	ENSLOCP00000013844	Uncharacterized protein.	MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase.	0.603
W5NKA2_LEPOC	LOC102693167	ENSLOCP00000021061	ENSLOCP00000007365	Uncharacterized protein.	Beta-1,3-N-acetylglucosaminyltransferase.	0.603
W5NKA2_LEPOC	W5NKA3_LEPOC	ENSLOCP00000021061	ENSLOCP00000021062	Uncharacterized protein.	Uncharacterized protein.	0.870
W5NKA2_LEPOC	notch1	ENSLOCP00000021061	ENSLOCP00000004070	Uncharacterized protein.	Notch receptor 1a.	0.743
W5NKA2_LEPOC	rfng	ENSLOCP00000021061	ENSLOCP00000015217	Uncharacterized protein.	Beta-1,3-N-acetylglucosaminyltransferase.	0.603
W5NKA2_LEPOC	tmed2	ENSLOCP00000021061	ENSLOCP00000006993	Uncharacterized protein.	Transmembrane p24 trafficking protein 2.	0.549
W5NKA3_LEPOC	LOC102690142	ENSLOCP00000021062	ENSLOCP00000013844	Uncharacterized protein.	MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase.	0.603
W5NKA3_LEPOC	LOC102693167	ENSLOCP00000021062	ENSLOCP00000007365	Uncharacterized protein.	Beta-1,3-N-acetylglucosaminyltransferase.	0.603