STRINGSTRING
rps27a rps27a W5ND91_LEPOC W5ND91_LEPOC marchf6 marchf6 LOC102696109 LOC102696109 marchf11 marchf11 edem1 edem1 rnf103 rnf103 edem3 edem3 marchf4 marchf4 marchf8 marchf8 rnf139 rnf139 MARCHF3 MARCHF3 marchf1 marchf1 uggt1 uggt1 W5MD03_LEPOC W5MD03_LEPOC marchf2 marchf2 edem2 edem2 marchf9 marchf9 uba52 uba52 W5M0X2_LEPOC W5M0X2_LEPOC W5M044_LEPOC W5M044_LEPOC W5MG05_LEPOC W5MG05_LEPOC
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
rps27aRibosomal protein S27a. (162 aa)
W5ND91_LEPOCUncharacterized protein. (96 aa)
marchf6Membrane-associated ring finger (C3HC4) 6. (914 aa)
LOC102696109RING-CH-type domain-containing protein. (237 aa)
marchf11Membrane-associated ring finger (C3HC4) 11. (341 aa)
edem1alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family. (637 aa)
rnf103Ring finger protein 103. (675 aa)
edem3alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family. (924 aa)
marchf4Membrane-associated ring finger (C3HC4) 4. (433 aa)
marchf8Membrane-associated ring finger (C3HC4) 8. (513 aa)
rnf139Ring finger protein 139. (671 aa)
MARCHF3Membrane associated ring-CH-type finger 3. (252 aa)
marchf1Membrane-associated ring finger (C3HC4) 1. (523 aa)
uggt1UDP-glucose glycoprotein glucosyltransferase 1. (1550 aa)
W5MD03_LEPOCUDP-glucose glycoprotein glucosyltransferase 2. (1527 aa)
marchf2Membrane-associated ring finger (C3HC4) 2. (242 aa)
edem2alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family. (586 aa)
marchf9Membrane-associated ring finger (C3HC4) 9. (239 aa)
uba52Ubiquitin A-52 residue ribosomal protein fusion product 1. (153 aa)
W5M0X2_LEPOCalpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family. (760 aa)
W5M044_LEPOCalpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family. (629 aa)
W5MG05_LEPOCMembrane-associated ring finger (C3HC4) 7. (757 aa)
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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