52 items (Lepisosteus oculatus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	kcp	Si:dkey-266m15.6. (2323 aa)
	W5NG31_LEPOC	Uncharacterized protein. (250 aa)
	JAG1	Delta-like protein; Putative Notch ligand involved in the mediation of Notch signaling. (1218 aa)
	W5NGT6_LEPOC	Uncharacterized protein. (233 aa)
	thbs2	Thrombospondin 2a. (1195 aa)
	W5NHK3_LEPOC	Otogelin-like. (2789 aa)
	nell2	Neural EGFL like 2a. (814 aa)
	ccn2	Cellular communication network factor 2a. (353 aa)
	vwf	Von Willebrand factor. (2840 aa)
	fbln2	Fibulin 2. (1286 aa)
	ECM2	Extracellular matrix protein 2. (746 aa)
	CHRDL1	Chordin like 1. (459 aa)
	W5N613_LEPOC	Zonadhesin, like. (2209 aa)
	W5N4L8_LEPOC	Uncharacterized protein. (939 aa)
	W5N420_LEPOC	Thrombospondin 1b. (1174 aa)
	W5MWB8_LEPOC	Delta-like protein; Putative Notch ligand involved in the mediation of Notch signaling. (1244 aa)
	W5MTD8_LEPOC	Uncharacterized protein. (721 aa)
	CCN3	Cellular communication network factor 3. (351 aa)
	chrd	Chordin; Belongs to the chordin family. (967 aa)
	sspo	Subcommissural organ spondin. (5892 aa)
	W5MKP6_LEPOC	Fraser extracellular matrix complex subunit 1. (4004 aa)
	W5MKH3_LEPOC	Cellular communication network factor 4a. (325 aa)
	W5MIW8_LEPOC	Uncharacterized protein. (792 aa)
	W5MIU5_LEPOC	Uncharacterized protein. (966 aa)
	W5MIS8_LEPOC	Uncharacterized protein. (2698 aa)
	col5a2	Collagen, type V, alpha 2a. (1502 aa)
	LOC102697758	Uncharacterized protein. (1465 aa)
	PXDNL	Peroxidasin like. (1493 aa)
	W5MEX7_LEPOC	Uncharacterized protein. (1662 aa)
	LOC102690103	Uncharacterized protein. (2001 aa)
	ccn1	Cellular communication network factor 1. (377 aa)
	col2a1	Collagen, type II, alpha 1b. (1492 aa)
	vwc2	Von Willebrand factor C domain containing 2. (317 aa)
	NELL1	Neural EGFL like 1. (811 aa)
	dgcr2	DiGeorge syndrome critical region gene 2. (544 aa)
	W5MAF2_LEPOC	Von Willebrand factor C domain containing 2 like. (229 aa)
	W5M863_LEPOC	Uncharacterized protein. (956 aa)
	LOC102688746	Uncharacterized protein. (5300 aa)
	W5M6Z1_LEPOC	Uncharacterized protein. (1936 aa)
	W5M406_LEPOC	Zgc:113531. (224 aa)
	W5M3M0_LEPOC	BMP binding endothelial regulator. (644 aa)
	LOC107079849	Cellular communication network factor 1, like 2. (376 aa)
	chrdl2	Chordin-like 2. (488 aa)
	W5M269_LEPOC	Otogelin. (2820 aa)
	ccn5	Uncharacterized protein. (349 aa)
	W5M111_LEPOC	Tectorin alpha. (2151 aa)
	W5LY19_LEPOC	NIDO domain-containing protein. (308 aa)
	LOC107076337	Uncharacterized protein. (165 aa)
	LOC102697526	Uncharacterized protein. (806 aa)
	W5LVB0_LEPOC	Uncharacterized protein. (435 aa)
	W5NKX8_LEPOC	Peroxidasin. (1498 aa)
	LOC102686187	Si:dkey-32e6.6. (661 aa)

Your Current Organism:

Lepisosteus oculatus

NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CHRDL1	W5MKP6_LEPOC	ENSLOCP00000017035	ENSLOCP00000008955	Chordin like 1.	Fraser extracellular matrix complex subunit 1.	0.460
ECM2	W5MKP6_LEPOC	ENSLOCP00000017076	ENSLOCP00000008955	Extracellular matrix protein 2.	Fraser extracellular matrix complex subunit 1.	0.407
JAG1	W5MKP6_LEPOC	ENSLOCP00000019657	ENSLOCP00000008955	Delta-like protein; Putative Notch ligand involved in the mediation of Notch signaling.	Fraser extracellular matrix complex subunit 1.	0.460
LOC102686187	W5MKP6_LEPOC	ENSLOCP00000019102	ENSLOCP00000008955	Si:dkey-32e6.6.	Fraser extracellular matrix complex subunit 1.	0.407
LOC102688746	W5MKP6_LEPOC	ENSLOCP00000004386	ENSLOCP00000008955	Uncharacterized protein.	Fraser extracellular matrix complex subunit 1.	0.596
LOC102690103	W5LY19_LEPOC	ENSLOCP00000006721	ENSLOCP00000001026	Uncharacterized protein.	NIDO domain-containing protein.	0.474
LOC102690103	W5M6Z1_LEPOC	ENSLOCP00000006721	ENSLOCP00000004149	Uncharacterized protein.	Uncharacterized protein.	0.484
LOC102690103	W5MKP6_LEPOC	ENSLOCP00000006721	ENSLOCP00000008955	Uncharacterized protein.	Fraser extracellular matrix complex subunit 1.	0.596
LOC102697526	W5MKP6_LEPOC	ENSLOCP00000000565	ENSLOCP00000008955	Uncharacterized protein.	Fraser extracellular matrix complex subunit 1.	0.614
LOC107076337	W5MKP6_LEPOC	ENSLOCP00000000568	ENSLOCP00000008955	Uncharacterized protein.	Fraser extracellular matrix complex subunit 1.	0.596
NELL1	W5MKP6_LEPOC	ENSLOCP00000005998	ENSLOCP00000008955	Neural EGFL like 1.	Fraser extracellular matrix complex subunit 1.	0.460
W5LVB0_LEPOC	W5MKP6_LEPOC	ENSLOCP00000000067	ENSLOCP00000008955	Uncharacterized protein.	Fraser extracellular matrix complex subunit 1.	0.460
W5LY19_LEPOC	LOC102690103	ENSLOCP00000001026	ENSLOCP00000006721	NIDO domain-containing protein.	Uncharacterized protein.	0.474
W5LY19_LEPOC	W5M6Z1_LEPOC	ENSLOCP00000001026	ENSLOCP00000004149	NIDO domain-containing protein.	Uncharacterized protein.	0.493
W5LY19_LEPOC	W5M863_LEPOC	ENSLOCP00000001026	ENSLOCP00000004571	NIDO domain-containing protein.	Uncharacterized protein.	0.688
W5LY19_LEPOC	W5MKP6_LEPOC	ENSLOCP00000001026	ENSLOCP00000008955	NIDO domain-containing protein.	Fraser extracellular matrix complex subunit 1.	0.596
W5M111_LEPOC	W5MKP6_LEPOC	ENSLOCP00000002068	ENSLOCP00000008955	Tectorin alpha.	Fraser extracellular matrix complex subunit 1.	0.596
W5M269_LEPOC	W5MKP6_LEPOC	ENSLOCP00000002477	ENSLOCP00000008955	Otogelin.	Fraser extracellular matrix complex subunit 1.	0.596
W5M3M0_LEPOC	W5MKP6_LEPOC	ENSLOCP00000002978	ENSLOCP00000008955	BMP binding endothelial regulator.	Fraser extracellular matrix complex subunit 1.	0.596
W5M3M0_LEPOC	chrd	ENSLOCP00000002978	ENSLOCP00000010777	BMP binding endothelial regulator.	Chordin; Belongs to the chordin family.	0.660