18 items (Daucus carota) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	DCAR_023477	Uncharacterized protein. (237 aa)
	DCAR_024346	Uncharacterized protein. (211 aa)
	DCAR_018854	Uncharacterized protein. (195 aa)
	DCAR_015108	Uncharacterized protein. (70 aa)
	DCAR_009405	Uncharacterized protein. (155 aa)
	DCAR_010387	zf-XS domain-containing protein. (112 aa)
	DCAR_010355	Uncharacterized protein. (163 aa)
	DCAR_023528	Uncharacterized protein. (270 aa)
	DCAR_026346	Uncharacterized protein. (114 aa)
	DCAR_017830	Uncharacterized protein. (93 aa)
	DCAR_015612	Uncharacterized protein. (90 aa)
	DCAR_015557	BURP domain-containing protein. (110 aa)
	DCAR_015127	Uncharacterized protein. (62 aa)
	DCAR_009708	Uncharacterized protein. (159 aa)
	DCAR_004728	Uncharacterized protein. (294 aa)
	DCAR_029384	Uncharacterized protein. (145 aa)
	DCAR_028854	Uncharacterized protein. (432 aa)
	DCAR_026453	Uncharacterized protein. (72 aa)

Your Current Organism:

Daucus carota

NCBI taxonomy Id: 79200
Other names: D. carota subsp. sativus, Daucus carota subsp. sativus, Daucus carota subsp. sativus (Hoffm.) Arcang., Daucus carota var. sativus

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DCAR_004728	DCAR_009405	A0A166JEA6	A0A162AGQ0	Uncharacterized protein.	Uncharacterized protein.	0.523
DCAR_004728	DCAR_009708	A0A166JEA6	A0A166AAL0	Uncharacterized protein.	Uncharacterized protein.	0.541
DCAR_004728	DCAR_010355	A0A166JEA6	A0A162AIY7	Uncharacterized protein.	Uncharacterized protein.	0.530
DCAR_004728	DCAR_010387	A0A166JEA6	A0A162AIN7	Uncharacterized protein.	zf-XS domain-containing protein.	0.503
DCAR_004728	DCAR_015108	A0A166JEA6	A0A162A9M4	Uncharacterized protein.	Uncharacterized protein.	0.540
DCAR_004728	DCAR_015127	A0A166JEA6	A0A165WMT8	Uncharacterized protein.	Uncharacterized protein.	0.538
DCAR_004728	DCAR_015557	A0A166JEA6	A0A165A869	Uncharacterized protein.	BURP domain-containing protein.	0.531
DCAR_004728	DCAR_015612	A0A166JEA6	A0A165A766	Uncharacterized protein.	Uncharacterized protein.	0.524
DCAR_004728	DCAR_017830	A0A166JEA6	A0A164YJ20	Uncharacterized protein.	Uncharacterized protein.	0.535
DCAR_004728	DCAR_018854	A0A166JEA6	A0A162A3D6	Uncharacterized protein.	Uncharacterized protein.	0.542
DCAR_004728	DCAR_023528	A0A166JEA6	A0A164SNV7	Uncharacterized protein.	Uncharacterized protein.	0.539
DCAR_004728	DCAR_024346	A0A166JEA6	A0A161ZJM1	Uncharacterized protein.	Uncharacterized protein.	0.528
DCAR_004728	DCAR_026346	A0A166JEA6	A0A164URX1	Uncharacterized protein.	Uncharacterized protein.	0.527
DCAR_004728	DCAR_026453	A0A166JEA6	A0A175YR48	Uncharacterized protein.	Uncharacterized protein.	0.542
DCAR_004728	DCAR_028854	A0A166JEA6	A0A175YJ26	Uncharacterized protein.	Uncharacterized protein.	0.543
DCAR_004728	DCAR_029384	A0A166JEA6	A0A175YF18	Uncharacterized protein.	Uncharacterized protein.	0.531
DCAR_009405	DCAR_004728	A0A162AGQ0	A0A166JEA6	Uncharacterized protein.	Uncharacterized protein.	0.523
DCAR_009405	DCAR_009708	A0A162AGQ0	A0A166AAL0	Uncharacterized protein.	Uncharacterized protein.	0.533
DCAR_009405	DCAR_010355	A0A162AGQ0	A0A162AIY7	Uncharacterized protein.	Uncharacterized protein.	0.508
DCAR_009405	DCAR_010387	A0A162AGQ0	A0A162AIN7	Uncharacterized protein.	zf-XS domain-containing protein.	0.523

page 1 of 16

Server load: low (22%) [HD]

Permalink

Network

Cooccurrence

Experiments

Coexpression

Databases

Neighborhood

Textmining

Fusion

© STRING Consortium 2025

Credits

Access

Info

About