12 items (Daucus carota) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

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co-expression

protein homology

Your Input:
	DCAR_006202	Ribosomal_S17_N domain-containing protein; Belongs to the universal ribosomal protein uS17 family. (128 aa)
	DCAR_007602	40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family. (52 aa)
	DCAR_001813	Uncharacterized protein. (82 aa)
	DCAR_017730	Uncharacterized protein; Belongs to the universal ribosomal protein uS12 family. (136 aa)
	DCAR_031522	Ribosomal_S13_N domain-containing protein; Belongs to the universal ribosomal protein uS15 family. (151 aa)
	DCAR_009692	Uncharacterized protein. (164 aa)
	DCAR_008693	60S ribosomal protein L27; Belongs to the eukaryotic ribosomal protein eL27 family. (135 aa)
	DCAR_002396	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family. (145 aa)
	DCAR_003475	40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family. (249 aa)
	DCAR_000378	KOW domain-containing protein. (146 aa)
	DCAR_032108	40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family. (126 aa)
	DCAR_027247	40S ribosomal protein S21; Belongs to the eukaryotic ribosomal protein eS21 family. (81 aa)

Your Current Organism:

Daucus carota

NCBI taxonomy Id: 79200
Other names: D. carota subsp. sativus, Daucus carota subsp. sativus, Daucus carota subsp. sativus (Hoffm.) Arcang., Daucus carota var. sativus

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DCAR_000378	DCAR_001813	A0A175Y907	A0A161YM08	KOW domain-containing protein.	Uncharacterized protein.	0.999
DCAR_000378	DCAR_002396	A0A175Y907	A0A166H597	KOW domain-containing protein.	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.	0.999
DCAR_000378	DCAR_003475	A0A175Y907	A0A166I785	KOW domain-containing protein.	40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.	0.996
DCAR_000378	DCAR_006202	A0A175Y907	A0A161X2Z3	KOW domain-containing protein.	Ribosomal_S17_N domain-containing protein; Belongs to the universal ribosomal protein uS17 family.	0.996
DCAR_000378	DCAR_007602	A0A175Y907	A0A161X791	KOW domain-containing protein.	40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.	0.999
DCAR_000378	DCAR_008693	A0A175Y907	A0A165ZEL1	KOW domain-containing protein.	60S ribosomal protein L27; Belongs to the eukaryotic ribosomal protein eL27 family.	0.999
DCAR_000378	DCAR_009692	A0A175Y907	A0A165YC77	KOW domain-containing protein.	Uncharacterized protein.	0.999
DCAR_000378	DCAR_017730	A0A175Y907	A0A161ZUV3	KOW domain-containing protein.	Uncharacterized protein; Belongs to the universal ribosomal protein uS12 family.	0.996
DCAR_000378	DCAR_027247	A0A175Y907	A0A175YII3	KOW domain-containing protein.	40S ribosomal protein S21; Belongs to the eukaryotic ribosomal protein eS21 family.	0.999
DCAR_000378	DCAR_031522	A0A175Y907	A0A164TV77	KOW domain-containing protein.	Ribosomal_S13_N domain-containing protein; Belongs to the universal ribosomal protein uS15 family.	0.995
DCAR_000378	DCAR_032108	A0A175Y907	A0A175Y9P2	KOW domain-containing protein.	40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family.	0.996
DCAR_001813	DCAR_000378	A0A161YM08	A0A175Y907	Uncharacterized protein.	KOW domain-containing protein.	0.999
DCAR_001813	DCAR_002396	A0A161YM08	A0A166H597	Uncharacterized protein.	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.	0.999
DCAR_001813	DCAR_003475	A0A161YM08	A0A166I785	Uncharacterized protein.	40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.	0.998
DCAR_001813	DCAR_006202	A0A161YM08	A0A161X2Z3	Uncharacterized protein.	Ribosomal_S17_N domain-containing protein; Belongs to the universal ribosomal protein uS17 family.	0.998
DCAR_001813	DCAR_007602	A0A161YM08	A0A161X791	Uncharacterized protein.	40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.	0.999
DCAR_001813	DCAR_008693	A0A161YM08	A0A165ZEL1	Uncharacterized protein.	60S ribosomal protein L27; Belongs to the eukaryotic ribosomal protein eL27 family.	0.999
DCAR_001813	DCAR_009692	A0A161YM08	A0A165YC77	Uncharacterized protein.	Uncharacterized protein.	0.999
DCAR_001813	DCAR_017730	A0A161YM08	A0A161ZUV3	Uncharacterized protein.	Uncharacterized protein; Belongs to the universal ribosomal protein uS12 family.	0.998
DCAR_001813	DCAR_027247	A0A161YM08	A0A175YII3	Uncharacterized protein.	40S ribosomal protein S21; Belongs to the eukaryotic ribosomal protein eS21 family.	0.999

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