39 items (Daucus carota) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	DCAR_007396	Uncharacterized protein. (596 aa)
	DCAR_022602	40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family. (219 aa)
	DCAR_024166	Uncharacterized protein. (141 aa)
	DCAR_016805	Uncharacterized protein. (976 aa)
	DCAR_017823	Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family. (358 aa)
	DCAR_018312	Uncharacterized protein. (188 aa)
	DCAR_019312	WD_REPEATS_REGION domain-containing protein. (537 aa)
	DCAR_014878	Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family. (333 aa)
	DCAR_014578	WD_REPEATS_REGION domain-containing protein. (930 aa)
	DCAR_013638	WD_REPEATS_REGION domain-containing protein. (715 aa)
	DCAR_013408	4Fe-4S ferredoxin-type domain-containing protein; Belongs to the universal ribosomal protein uS11 family. (1236 aa)
	DCAR_011267	RRM domain-containing protein. (296 aa)
	DCAR_007660	Uncharacterized protein. (754 aa)
	DCAR_008420	Uncharacterized protein. (253 aa)
	DCAR_025482	Utp12 domain-containing protein. (624 aa)
	DCAR_018927	Uncharacterized protein. (2394 aa)
	DCAR_019081	Sas10 domain-containing protein. (627 aa)
	DCAR_014109	Kri1_C domain-containing protein. (608 aa)
	DCAR_013032	WD_REPEATS_REGION domain-containing protein. (561 aa)
	DCAR_012819	Uncharacterized protein. (320 aa)
	DCAR_008858	Uncharacterized protein. (282 aa)
	DCAR_009531	Uncharacterized protein. (1479 aa)
	DCAR_012372	Uncharacterized protein. (1323 aa)
	DCAR_007397	Uncharacterized protein. (752 aa)
	DCAR_007503	Helicase C-terminal domain-containing protein. (218 aa)
	DCAR_007758	Uncharacterized protein; Belongs to the universal ribosomal protein uS11 family. (150 aa)
	DCAR_001396	RRM domain-containing protein. (136 aa)
	DCAR_002396	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family. (145 aa)
	DCAR_004236	Uncharacterized protein. (238 aa)
	DCAR_000230	Utp12 domain-containing protein. (143 aa)
	rps11	Ribosomal protein S11; Belongs to the universal ribosomal protein uS11 family. (138 aa)
	DCAR_029081	Uncharacterized protein. (159 aa)
	DCAR_027247	40S ribosomal protein S21; Belongs to the eukaryotic ribosomal protein eS21 family. (81 aa)
	DCAR_030710	Uncharacterized protein. (312 aa)
	DCAR_028193	Ubiquitin-like domain-containing protein. (1755 aa)
	DCAR_028088	Uncharacterized protein. (397 aa)
	DCAR_027698	BP28CT domain-containing protein. (2166 aa)
	DCAR_027245	Bms1-type G domain-containing protein. (1183 aa)
	DCAR_026667	40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family. (220 aa)

Your Current Organism:

Daucus carota

NCBI taxonomy Id: 79200
Other names: D. carota subsp. sativus, Daucus carota subsp. sativus, Daucus carota subsp. sativus (Hoffm.) Arcang., Daucus carota var. sativus

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DCAR_000230	DCAR_001396	A0A175Y9B4	A0A166GAH3	Utp12 domain-containing protein.	RRM domain-containing protein.	0.761
DCAR_000230	DCAR_002396	A0A175Y9B4	A0A166H597	Utp12 domain-containing protein.	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.	0.982
DCAR_000230	DCAR_007396	A0A175Y9B4	A0A161XHN6	Utp12 domain-containing protein.	Uncharacterized protein.	0.888
DCAR_000230	DCAR_007397	A0A175Y9B4	A0A166EH65	Utp12 domain-containing protein.	Uncharacterized protein.	0.888
DCAR_000230	DCAR_007503	A0A175Y9B4	A0A166EK14	Utp12 domain-containing protein.	Helicase C-terminal domain-containing protein.	0.970
DCAR_000230	DCAR_007660	A0A175Y9B4	A0A162AWJ8	Utp12 domain-containing protein.	Uncharacterized protein.	0.731
DCAR_000230	DCAR_007758	A0A175Y9B4	A0A166ESF8	Utp12 domain-containing protein.	Uncharacterized protein; Belongs to the universal ribosomal protein uS11 family.	0.948
DCAR_000230	DCAR_008420	A0A175Y9B4	A0A162AYB7	Utp12 domain-containing protein.	Uncharacterized protein.	0.809
DCAR_000230	DCAR_008858	A0A175Y9B4	A0A165ZJD0	Utp12 domain-containing protein.	Uncharacterized protein.	0.987
DCAR_000230	DCAR_009531	A0A175Y9B4	A0A166A5V2	Utp12 domain-containing protein.	Uncharacterized protein.	0.909
DCAR_000230	DCAR_011267	A0A175Y9B4	A0A162AKP0	Utp12 domain-containing protein.	RRM domain-containing protein.	0.761
DCAR_000230	DCAR_012372	A0A175Y9B4	A0A166CDA9	Utp12 domain-containing protein.	Uncharacterized protein.	0.970
DCAR_000230	DCAR_012819	A0A175Y9B4	A0A165ZAW0	Utp12 domain-containing protein.	Uncharacterized protein.	0.987
DCAR_000230	DCAR_013408	A0A175Y9B4	A0A162ADI1	Utp12 domain-containing protein.	4Fe-4S ferredoxin-type domain-containing protein; Belongs to the universal ribosomal protein uS11 family.	0.948
DCAR_000230	DCAR_013638	A0A175Y9B4	A0A162ACY6	Utp12 domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.995
DCAR_000230	DCAR_014109	A0A175Y9B4	A0A165XU35	Utp12 domain-containing protein.	Kri1_C domain-containing protein.	0.837
DCAR_000230	DCAR_014578	A0A175Y9B4	A0A162AAQ6	Utp12 domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.999
DCAR_000230	DCAR_014878	A0A175Y9B4	A0A162AA21	Utp12 domain-containing protein.	Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family.	0.793
DCAR_000230	DCAR_016805	A0A175Y9B4	A0A162A178	Utp12 domain-containing protein.	Uncharacterized protein.	0.909
DCAR_000230	DCAR_017823	A0A175Y9B4	A0A162A3A9	Utp12 domain-containing protein.	Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family.	0.793

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