30 items (Daucus carota) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	DCAR_024262	Ribosomal_L14e domain-containing protein. (134 aa)
	DCAR_026031	Eukaryotic translation initiation factor 5A. (158 aa)
	DCAR_022504	Ribosomal_L2_C domain-containing protein. (259 aa)
	DCAR_019834	60S ribosomal protein L6; Belongs to the eukaryotic ribosomal protein eL6 family. (227 aa)
	DCAR_016450	Uncharacterized protein. (296 aa)
	DCAR_018435	KOW domain-containing protein; Belongs to the universal ribosomal protein uL24 family. (327 aa)
	DCAR_003450	Ribosomal_L2_C domain-containing protein. (235 aa)
	DCAR_002717	KOW domain-containing protein. (159 aa)
	DCAR_001109	Transcription elongation factor SPT5. (1004 aa)
	DCAR_010398	NGN domain-containing protein. (385 aa)
	DCAR_010233	Transcription elongation factor SPT5. (1023 aa)
	DCAR_010010	Ribosomal_L2_C domain-containing protein. (258 aa)
	DCAR_010008	Ribosomal_L2_C domain-containing protein. (258 aa)
	DCAR_008693	60S ribosomal protein L27; Belongs to the eukaryotic ribosomal protein eL27 family. (135 aa)
	DCAR_012725	KOW domain-containing protein; Belongs to the universal ribosomal protein uL24 family. (177 aa)
	DCAR_013561	60S ribosomal protein L6; Belongs to the eukaryotic ribosomal protein eL6 family. (232 aa)
	DCAR_009692	Uncharacterized protein. (164 aa)
	DCAR_014811	Eukaryotic translation initiation factor 5A. (158 aa)
	DCAR_026178	Uncharacterized protein. (155 aa)
	DCAR_008336	Uncharacterized protein. (439 aa)
	DCAR_017908	Eukaryotic translation initiation factor 5A. (124 aa)
	DCAR_023975	Uncharacterized protein. (228 aa)
	DCAR_019794	60S ribosomal protein L6; Belongs to the eukaryotic ribosomal protein eL6 family. (230 aa)
	DCAR_025361	Uncharacterized protein. (162 aa)
	DCAR_027327	Ribosomal_L14e domain-containing protein. (134 aa)
	DCAR_030751	Ribosomal_L14e domain-containing protein. (133 aa)
	DCAR_030986	Eukaryotic translation initiation factor 5A. (159 aa)
	rpl2-2	Ribosomal protein L2. (264 aa)
	rpl2	Ribosomal protein L2. (274 aa)
	DCAR_000378	KOW domain-containing protein. (146 aa)

Your Current Organism:

Daucus carota

NCBI taxonomy Id: 79200
Other names: D. carota subsp. sativus, Daucus carota subsp. sativus, Daucus carota subsp. sativus (Hoffm.) Arcang., Daucus carota var. sativus

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DCAR_000378	DCAR_003450	A0A175Y907	A0A166I699	KOW domain-containing protein.	Ribosomal_L2_C domain-containing protein.	0.933
DCAR_000378	DCAR_008336	A0A175Y907	A0A161XJS3	KOW domain-containing protein.	Uncharacterized protein.	0.978
DCAR_000378	DCAR_008693	A0A175Y907	A0A165ZEL1	KOW domain-containing protein.	60S ribosomal protein L27; Belongs to the eukaryotic ribosomal protein eL27 family.	0.999
DCAR_000378	DCAR_009692	A0A175Y907	A0A165YC77	KOW domain-containing protein.	Uncharacterized protein.	0.999
DCAR_000378	DCAR_010008	A0A175Y907	A0A166AHG6	KOW domain-containing protein.	Ribosomal_L2_C domain-containing protein.	0.995
DCAR_000378	DCAR_010010	A0A175Y907	A0A166AHI0	KOW domain-containing protein.	Ribosomal_L2_C domain-containing protein.	0.995
DCAR_000378	DCAR_013561	A0A175Y907	A0A165YHA7	KOW domain-containing protein.	60S ribosomal protein L6; Belongs to the eukaryotic ribosomal protein eL6 family.	0.996
DCAR_000378	DCAR_014811	A0A175Y907	A0A165X0K2	KOW domain-containing protein.	Eukaryotic translation initiation factor 5A.	0.935
DCAR_000378	DCAR_016450	A0A175Y907	A0A164XI08	KOW domain-containing protein.	Uncharacterized protein.	0.978
DCAR_000378	DCAR_017908	A0A175Y907	A0A161XSK7	KOW domain-containing protein.	Eukaryotic translation initiation factor 5A.	0.935
DCAR_000378	DCAR_019794	A0A175Y907	A0A162A5N9	KOW domain-containing protein.	60S ribosomal protein L6; Belongs to the eukaryotic ribosomal protein eL6 family.	0.996
DCAR_000378	DCAR_019834	A0A175Y907	A0A164X7E7	KOW domain-containing protein.	60S ribosomal protein L6; Belongs to the eukaryotic ribosomal protein eL6 family.	0.996
DCAR_000378	DCAR_022504	A0A175Y907	A0A164VCH2	KOW domain-containing protein.	Ribosomal_L2_C domain-containing protein.	0.995
DCAR_000378	DCAR_023975	A0A175Y907	A0A161Y750	KOW domain-containing protein.	Uncharacterized protein.	0.894
DCAR_000378	DCAR_024262	A0A175Y907	A0A164T6K8	KOW domain-containing protein.	Ribosomal_L14e domain-containing protein.	0.996
DCAR_000378	DCAR_025361	A0A175Y907	A0A164U0Z0	KOW domain-containing protein.	Uncharacterized protein.	0.894
DCAR_000378	DCAR_026031	A0A175Y907	A0A164UJE5	KOW domain-containing protein.	Eukaryotic translation initiation factor 5A.	0.935
DCAR_000378	DCAR_026178	A0A175Y907	A0A161X953	KOW domain-containing protein.	Uncharacterized protein.	0.978
DCAR_000378	DCAR_027327	A0A175Y907	A0A175YQ44	KOW domain-containing protein.	Ribosomal_L14e domain-containing protein.	0.994
DCAR_000378	DCAR_030751	A0A175Y907	A0A175YK02	KOW domain-containing protein.	Ribosomal_L14e domain-containing protein.	0.994

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