STRINGSTRING
dnmt1 dnmt1 aebp2 aebp2 ezh2 ezh2 wdr73 wdr73 suv39h1a suv39h1a hat1 hat1 rbbp4 rbbp4 hist2h2l hist2h2l asf1bb asf1bb hist1h2a4 hist1h2a4 zgc:173552 zgc:173552 zgc:194989 zgc:194989 suv39h1b suv39h1b chaf1b chaf1b mphosph8 mphosph8 hist1h4l hist1h4l jarid2a jarid2a hist1h4l-2 hist1h4l-2 jarid2b jarid2b zgc:113983 zgc:113983 kat2b kat2b h3f3a-2 h3f3a-2 h2az2a h2az2a hist1h2a10 hist1h2a10 h2ax1 h2ax1 dnmt3aa dnmt3aa ezh1 ezh1 suz12a suz12a hist1h2a3 hist1h2a3 ENSDARP00000099321 ENSDARP00000099321 zgc:173587 zgc:173587 chaf1a chaf1a hist1h2a5 hist1h2a5 LOC100148591 LOC100148591 kmt5c kmt5c hist1h2a2 hist1h2a2 mysm1 mysm1 zgc:113984 zgc:113984 dnmt3ba dnmt3ba mtf2 mtf2 dnmt3bb.2 dnmt3bb.2 hist2h3c hist2h3c cbx5 cbx5 nasp nasp h3f3d h3f3d zgc:92591 zgc:92591 phf19 phf19 hira hira h3f3a h3f3a h3f3b.1 h3f3b.1 dnmt3ab dnmt3ab R4GE02_DANRE R4GE02_DANRE R4GE15_DANRE R4GE15_DANRE zgc:173552-2 zgc:173552-2 zgc:114046 zgc:114046 zgc:162611-2 zgc:162611-2 X1WDH8_DANRE X1WDH8_DANRE ENSDARP00000128298 ENSDARP00000128298 X1WH60_DANRE X1WH60_DANRE X1WHF1_DANRE X1WHF1_DANRE ehmt2 ehmt2 suz12b suz12b ENSDARP00000130595 ENSDARP00000130595 eed eed ppiab ppiab uhrf1 uhrf1 zgc:158376 zgc:158376 ENSDARP00000135695 ENSDARP00000135695 zgc:173552-3 zgc:173552-3 h2af1al h2af1al ENSDARP00000139024 ENSDARP00000139024 macroh2a1 macroh2a1 asf1ba asf1ba ENSDARP00000140767 ENSDARP00000140767 hist1h2a6 hist1h2a6 ENSDARP00000142122 ENSDARP00000142122 hist2h3ca1 hist2h3ca1 ENSDARP00000142232 ENSDARP00000142232 hist1h4l-7 hist1h4l-7 ENSDARP00000142272 ENSDARP00000142272 ENSDARP00000142451 ENSDARP00000142451 ENSDARP00000142481 ENSDARP00000142481 ENSDARP00000142515 ENSDARP00000142515 phf14 phf14 kdm2ab kdm2ab tet3 tet3 ENSDARP00000145961 ENSDARP00000145961 ENSDARP00000146454 ENSDARP00000146454 h3f3c h3f3c zgc:173552-4 zgc:173552-4 ENSDARP00000149802 ENSDARP00000149802 hist1h4l-19 hist1h4l-19 zgc:173552-5 zgc:173552-5 kdm2ba kdm2ba ENSDARP00000153520 ENSDARP00000153520 zgc:173552-6 zgc:173552-6 zgc:173552-7 zgc:173552-7 ENSDARP00000156321 ENSDARP00000156321
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
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textmining
co-expression
protein homology
Your Input:
dnmt1DNA (cytosine-5)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family. (1500 aa)
aebp2Zinc finger protein AEBP2; DNA-binding transcriptional repressor. May interact with and stimulate the activity of histone methyltransferase complexes. (415 aa)
ezh2Histone-lysine N-methyltransferase EZH2; Polycomb group (PcG) protein. Catalytic subunit of the prc2/eed-ezh2 complex, which methylates 'Lys-9' and 'Lys-27' of histone H3, leading to transcriptional repression of the affected target gene. May regulate the circadian clock via histone methylation at the promoter of the circadian genes; Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. EZ subfamily. (760 aa)
wdr73WD repeat-containing protein 73; May play a role in the regulation of microtubule organization and dynamics; Belongs to the WD repeat WDR73 family. (376 aa)
suv39h1aHistone-lysine N-methyltransferase SUV39H1-A; Histone methyltransferase that specifically trimethylates 'Lys-9' of histone H3 using monomethylated H3 'Lys-9' as substrate. H3 'Lys-9' trimethylation represents a specific tag for epigenetic transcriptional repression by recruiting HP1 (CBX1, CBX3 and/or CBX5) proteins to methylated histones. Mainly functions in heterochromatin regions, thereby playing a central role in the establishment of constitutive heterochromatin at pericentric and telomere regions. H3 'Lys-9' trimethylation is also required to direct DNA methylation at pericentric [...] (411 aa)
hat1Histone acetyltransferase type B catalytic subunit; Acetylates soluble but not nucleosomal histone H4 at 'Lys-5' (H4K5ac) and 'Lys-12' (H4K12ac) and, to a lesser extent, acetylates histone H2A at 'Lys-5' (H2AK5ac). Has intrinsic substrate specificity that modifies lysine in recognition sequence GXGKXG. (408 aa)
rbbp4Histone-binding protein RBBP4; Core histone-binding subunit that may target chromatin assembly factors, chromatin remodeling factors and histone deacetylases to their histone substrates in a manner that is regulated by nucleosomal DNA. (424 aa)
hist2h2lHistone H2B 3; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (126 aa)
asf1bbHistone chaperone asf1b-B; Histone chaperone that facilitates histone deposition and histone exchange and removal during nucleosome assembly and disassembly. (197 aa)
hist1h2a4Histone H2A; Belongs to the histone H2A family. (128 aa)
zgc:173552Histone H3; Belongs to the histone H3 family. (136 aa)
zgc:194989Histone H2B; Belongs to the histone H2B family. (124 aa)
suv39h1bHistone-lysine N-methyltransferase; Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. Suvar3-9 subfamily. (421 aa)
chaf1bChromatin assembly factor 1, subunit B. (613 aa)
mphosph8M-phase phosphoprotein 8. (946 aa)
hist1h4lHistone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (103 aa)
jarid2aJumonji, AT-rich interactive domain 2a. (1171 aa)
hist1h4l-2Zgc:153409. (103 aa)
jarid2bProtein Jumonji; Regulator of histone methyltransferase complexes that plays an essential role in embryonic development. Acts by modulating histone methyltransferase activity and promoting the recruitment of histone methyltransferase complexes to their target genes. Binds DNA and mediates the recruitment of the PRC2 complex to target genes in embryonic stem cells. Does not have histone demethylase activity but regulates activity of various histone methyltransferase complexes. In embryonic stem cells, it associates with the PRC2 complex and inhibits trimethylation of 'Lys-27' of histone [...] (1319 aa)
zgc:113983Histone H3.2; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (136 aa)
kat2bHistone acetyltransferase KAT2B; Functions as a histone acetyltransferase (HAT) to promote transcriptional activation (By similarity). Has significant histone acetyltransferase activity with core histones (H3 and H4), and also with nucleosome core particles (By similarity). Also acetylates non- histone proteins. Involved in heart and limb development by mediating acetylation of tbx5. Also acetylates spermidine (By similarity). Together with kat2a, required for growth and differentiation of craniofacial cartilage and bone by regulating acetylation of histone H3 at 'Lys-9' (H3K9ac) ; Bel [...] (796 aa)
h3f3a-2Histone H3.3; Variant histone H3 which replaces conventional H3 in a wide range of nucleosomes in active genes. Constitutes the predominant form of histone H3 in non-dividing cells and is incorporated into chromatin independently of DNA synthesis. Deposited at sites of nucleosomal displacement throughout transcribed genes, suggesting that it represents an epigenetic imprint of transcriptionally active chromatin. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in [...] (136 aa)
h2az2aHistone H2A.V; Variant histone H2A which replaces conventional H2A in a subset of nucleosomes. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post- translational modifications of histones, also called histone code, and nucleosome remodeling. May be involved in the formation of constitutive heterochromatin. May be required for c [...] (128 aa)
hist1h2a10Histone H2A; Belongs to the histone H2A family. (128 aa)
h2ax1Histone H2A; Belongs to the histone H2A family. (128 aa)
dnmt3aaDNA (cytosine-5-)-methyltransferase 3 alpha a; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family. (852 aa)
ezh1Enhancer of zeste 1 polycomb repressive complex 2 subunit. (147 aa)
suz12aPolycomb protein suz12-A; Polycomb group (PcG) protein. Component of the prc2/eed-ezh2 complex, which methylates 'Lys-9' and 'Lys-27' of histone H3, leading to transcriptional repression of the affected target gene (By similarity). (657 aa)
hist1h2a3Histone H2A; Belongs to the histone H2A family. (128 aa)
ENSDARP00000099321Histone H3.2. (136 aa)
zgc:173587Histone H2B 1/2; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (124 aa)
chaf1aChromatin assembly factor 1 subunit A; May be involved in chromatin assembly in DNA replication and DNA repair; Belongs to the CHAF1A family. (863 aa)
hist1h2a5Histone H2A; Belongs to the histone H2A family. (128 aa)
LOC100148591Histone H2A; Belongs to the histone H2A family. (128 aa)
kmt5cLysine methyltransferase 5C. (519 aa)
hist1h2a2Histone cluster 1 H2A family member 2. (128 aa)
mysm1Histone H2A deubiquitinase MYSM1; Metalloprotease that specifically deubiquitinates monoubiquitinated histone H2A, a specific tag for epigenetic transcriptional repression, thereby acting as a coactivator. Preferentially deubiquitinates monoubiquitinated H2A in hyperacetylated nucleosomes. Deubiquitination of histone H2A leads to facilitate the phosphorylation and dissociation of histone H1 from the nucleosome. Acts as a coactivator by participating in the initiation and elongation steps of androgen receptor (AR)-induced gene activation (By similarity). (822 aa)
zgc:113984Zgc:173552. (136 aa)
dnmt3baDNA (cytosine-5-)-methyltransferase 3 beta, duplicate a; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family. (1500 aa)
mtf2Metal response element-binding transcription factor 2. (605 aa)
dnmt3bb.2DNA (cytosine-5-)-methyltransferase 3 beta, duplicate b.2; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family. (1448 aa)
hist2h3cHistone cluster 2, H3c. (136 aa)
cbx5Chromobox homolog 5 (HP1 alpha homolog, Drosophila). (204 aa)
naspNuclear autoantigenic sperm protein (histone-binding). (622 aa)
h3f3dH3 histone, family 3D. (136 aa)
zgc:92591Histone H2B; Belongs to the histone H2B family. (118 aa)
phf19PHD finger protein 19. (562 aa)
hiraProtein HIRA; Required for replication-independent chromatin assembly and for the periodic repression of histone gene transcription during the cell cycle; Belongs to the WD repeat HIR1 family. (1010 aa)
h3f3aH3 histone, family 3B.1. (136 aa)
h3f3b.1H3 histone, family 3B.1. (136 aa)
dnmt3abDNA (cytosine-5-)-methyltransferase 3 alpha b; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family. (978 aa)
R4GE02_DANRESi:ch211-113a14.11; Belongs to the histone H2A family. (248 aa)
R4GE15_DANREHistone H2B; Belongs to the histone H2B family. (124 aa)
zgc:173552-2Zgc:173552. (136 aa)
zgc:114046Histone H2B; Belongs to the histone H2B family. (127 aa)
zgc:162611-2Si:dkey-108k21.24. (151 aa)
X1WDH8_DANREHistone H2B; Belongs to the histone H2B family. (124 aa)
ENSDARP00000128298Si:dkey-108k21.19. (128 aa)
X1WH60_DANREHistone H2B; Belongs to the histone H2B family. (125 aa)
X1WHF1_DANREHistone H2B; Belongs to the histone H2B family. (124 aa)
ehmt2Euchromatic histone-lysine N-methyltransferase 2. (1167 aa)
suz12bPolycomb protein suz12-B; Polycomb group (PcG) protein. Component of the prc2/eed-ezh2 complex, which methylates 'Lys-9' and 'Lys-27' of histone H3, leading to transcriptional repression of the affected target gene (By similarity). (682 aa)
ENSDARP00000130595Histone H3.2. (136 aa)
eedPolycomb protein eed; Polycomb group (PcG) protein. Component of the prc2/eed-ezh2 complex, which methylates 'Lys-9' and 'Lys-27' of histone H3, leading to transcriptional repression of the affected target gene (By similarity). (443 aa)
ppiabPeptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (164 aa)
uhrf1E3 ubiquitin-protein ligase UHRF1; Multidomain protein that acts as a key epigenetic regulator by bridging DNA methylation and chromatin modification. Specifically recognizes and binds hemimethylated DNA at replication forks via its YDG domain and recruits dnmt1 methyltransferase to ensure faithful propagation of the DNA methylation patterns through DNA replication. In addition to its role in maintenance of DNA methylation, also plays a key role in chromatin modification: through its tudor-like regions and PHD-type zinc fingers, specifically recognizes and binds histone H3 trimethylate [...] (775 aa)
zgc:158376Zgc:158376. (765 aa)
ENSDARP00000135695Histone H3.2. (136 aa)
zgc:173552-3Zgc:173552. (136 aa)
h2af1alHistone H2A; Belongs to the histone H2A family. (140 aa)
ENSDARP00000139024Histone H3.2. (136 aa)
macroh2a1Core histone macro-H2A; Variant histone H2A which replaces conventional H2A in a subset of nucleosomes. (357 aa)
asf1baHistone chaperone asf1b-A; Histone chaperone that facilitates histone deposition and histone exchange and removal during nucleosome assembly and disassembly. (197 aa)
ENSDARP00000140767Histone H3.2. (136 aa)
hist1h2a6Histone H2A; Belongs to the histone H2A family. (127 aa)
ENSDARP00000142122Histone H3.2. (136 aa)
hist2h3ca1Histone H3; Belongs to the histone H3 family. (136 aa)
ENSDARP00000142232Histone H2B; Belongs to the histone H2B family. (124 aa)
hist1h4l-7Histone 1, H4, like. (103 aa)
ENSDARP00000142272Histone H3.2. (136 aa)
ENSDARP00000142451Histone H2A; Belongs to the histone H2A family. (127 aa)
ENSDARP00000142481Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (94 aa)
ENSDARP00000142515Histone H3.2. (136 aa)
phf14PHD finger protein 14. (914 aa)
kdm2abLysine (K)-specific demethylase 2Ab. (1271 aa)
tet3Tet methylcytosine dioxygenase 3. (2052 aa)
ENSDARP00000145961Histone H3.2. (136 aa)
ENSDARP00000146454Histone H3.2. (136 aa)
h3f3cH3 histone, family 3C. (136 aa)
zgc:173552-4Zgc:173552. (136 aa)
ENSDARP00000149802Si:dkey-261m9.8. (136 aa)
hist1h4l-19Histone 1, H4, like. (103 aa)
zgc:173552-5Zgc:173552. (136 aa)
kdm2baLysine (K)-specific demethylase 2Ba. (883 aa)
ENSDARP00000153520Si:ch73-36p18.2. (136 aa)
zgc:173552-6Zgc:173552. (136 aa)
zgc:173552-7Zgc:173552. (136 aa)
ENSDARP00000156321Si:dkey-108k21.25. (136 aa)
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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