32 items (Danio rerio) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

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Your Input:
	spns1	Protein spinster homolog 1; Sphingolipid transporter. (504 aa)
	mfsd6l	Major facilitator superfamily domain-containing protein 6-like. (542 aa)
	mfsd13a	Major facilitator superfamily domain-containing 13A. (504 aa)
	mfsd2ab	Sodium-dependent lysophosphatidylcholine symporter 1-B; Sodium-dependent lysophosphatidylcholine (LPC) symporter, which plays an essential role for blood-brain barrier formation and function. Specifically expressed in endothelium of the blood-brain barrier of micro-vessels and transports LPC into the brain. Transport of LPC is essential because it constitutes the major mechanism by which docosahexaenoic acid (DHA), an omega-3 fatty acid that is essential for normal brain growth and cognitive function, enters the brain. Transports LPC carrying long-chain fatty acids such LPC oleate and [...] (523 aa)
	spns3	Protein spinster homolog 3; Sphingolipid transporter; Belongs to the major facilitator superfamily. Spinster (TC 2.A.1.49) family. (498 aa)
	arl11	ADP-ribosylation factor-like 11; Belongs to the small GTPase superfamily. Arf family. (176 aa)
	mfsd6a	Major facilitator superfamily domain-containing protein 6-A. (793 aa)
	stk17a	Serine/threonine kinase 17a; Belongs to the protein kinase superfamily. (367 aa)
	cpvl	Carboxypeptidase, vitellogenic-like; Belongs to the peptidase S10 family. (478 aa)
	svopl	Putative transporter SVOPL. (506 aa)
	sv2ca	Synaptic vesicle glycoprotein 2Ca. (745 aa)
	mfsd12a	Major facilitator superfamily domain-containing 12a. (489 aa)
	svopa	SV2-related protein a. (540 aa)
	fam207a	Family with sequence similarity 207 member A. (245 aa)
	slc29a3	Solute carrier family 29 member 3. (335 aa)
	LOC100002406	Solute carrier family 46 member 2. (406 aa)
	mfsd4b	Sodium-dependent glucose transporter 1; May function as a sodium-dependent glucose transporter. Potential channels for urea in the inner medulla of kidney. Belongs to the major facilitator superfamily. (594 aa)
	mfsd9	Major facilitator superfamily domain-containing 9. (434 aa)
	mfsd10	Major facilitator superfamily domain-containing 10. (450 aa)
	slc29a2	Solute carrier family 29 member 2. (450 aa)
	nab1a	NGFI-A-binding protein 1a (EGR1 binding protein 1). (486 aa)
	Chrna11	Si:ch211-39a7.1. (589 aa)
	unc93a	Protein unc-93 homolog A. (484 aa)
	mfsd2b	Major facilitator superfamily domain-containing 2B. (551 aa)
	SLC29A4	Si:ch211-160d14.6. (521 aa)
	MFSD3	Si:dkey-229d2.4. (417 aa)
	mfsd1	Major facilitator superfamily domain-containing protein 1. (459 aa)
	wu:fb14d09	Aldedh domain-containing protein; Belongs to the aldehyde dehydrogenase family. (327 aa)
	sv2a	Synaptic vesicle glycoprotein 2A. (733 aa)
	mfsd11	Major facilitator superfamily domain-containing 11. (353 aa)
	plcd4a	Phosphoinositide phospholipase C. (761 aa)
	sv2bb	Synaptic vesicle glycoprotein 2Bb. (687 aa)

Your Current Organism:

Danio rerio

NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Chrna11	sv2ca	ENSDARP00000120968	ENSDARP00000078459	Si:ch211-39a7.1.	Synaptic vesicle glycoprotein 2Ca.	0.847
LOC100002406	SLC29A4	ENSDARP00000100545	ENSDARP00000127033	Solute carrier family 46 member 2.	Si:ch211-160d14.6.	0.843
LOC100002406	mfsd10	ENSDARP00000100545	ENSDARP00000105445	Solute carrier family 46 member 2.	Major facilitator superfamily domain-containing 10.	0.824
LOC100002406	mfsd4b	ENSDARP00000100545	ENSDARP00000101496	Solute carrier family 46 member 2.	Sodium-dependent glucose transporter 1; May function as a sodium-dependent glucose transporter. Potential channels for urea in the inner medulla of kidney. Belongs to the major facilitator superfamily.	0.563
LOC100002406	mfsd9	ENSDARP00000100545	ENSDARP00000103276	Solute carrier family 46 member 2.	Major facilitator superfamily domain-containing 9.	0.861
LOC100002406	slc29a2	ENSDARP00000100545	ENSDARP00000116682	Solute carrier family 46 member 2.	Solute carrier family 29 member 2.	0.847
LOC100002406	slc29a3	ENSDARP00000100545	ENSDARP00000098767	Solute carrier family 46 member 2.	Solute carrier family 29 member 3.	0.815
LOC100002406	svopa	ENSDARP00000100545	ENSDARP00000089497	Solute carrier family 46 member 2.	SV2-related protein a.	0.528
LOC100002406	svopl	ENSDARP00000100545	ENSDARP00000075190	Solute carrier family 46 member 2.	Putative transporter SVOPL.	0.540
LOC100002406	unc93a	ENSDARP00000100545	ENSDARP00000121615	Solute carrier family 46 member 2.	Protein unc-93 homolog A.	0.470
MFSD3	mfsd1	ENSDARP00000130274	ENSDARP00000132899	Si:dkey-229d2.4.	Major facilitator superfamily domain-containing protein 1.	0.804
MFSD3	mfsd10	ENSDARP00000130274	ENSDARP00000105445	Si:dkey-229d2.4.	Major facilitator superfamily domain-containing 10.	0.670
MFSD3	mfsd11	ENSDARP00000130274	ENSDARP00000141421	Si:dkey-229d2.4.	Major facilitator superfamily domain-containing 11.	0.850
MFSD3	mfsd12a	ENSDARP00000130274	ENSDARP00000083300	Si:dkey-229d2.4.	Major facilitator superfamily domain-containing 12a.	0.686
MFSD3	mfsd13a	ENSDARP00000130274	ENSDARP00000012104	Si:dkey-229d2.4.	Major facilitator superfamily domain-containing 13A.	0.834
MFSD3	mfsd2ab	ENSDARP00000130274	ENSDARP00000047460	Si:dkey-229d2.4.	Sodium-dependent lysophosphatidylcholine symporter 1-B; Sodium-dependent lysophosphatidylcholine (LPC) symporter, which plays an essential role for blood-brain barrier formation and function. Specifically expressed in endothelium of the blood-brain barrier of micro-vessels and transports LPC into the brain. Transport of LPC is essential because it constitutes the major mechanism by which docosahexaenoic acid (DHA), an omega-3 fatty acid that is essential for normal brain growth and cognitive function, enters the brain. Transports LPC carrying long-chain fatty acids such LPC oleate and [...]	0.712
MFSD3	mfsd2b	ENSDARP00000130274	ENSDARP00000123567	Si:dkey-229d2.4.	Major facilitator superfamily domain-containing 2B.	0.817
MFSD3	mfsd6a	ENSDARP00000130274	ENSDARP00000063028	Si:dkey-229d2.4.	Major facilitator superfamily domain-containing protein 6-A.	0.732
MFSD3	mfsd6l	ENSDARP00000130274	ENSDARP00000010172	Si:dkey-229d2.4.	Major facilitator superfamily domain-containing protein 6-like.	0.806
MFSD3	mfsd9	ENSDARP00000130274	ENSDARP00000103276	Si:dkey-229d2.4.	Major facilitator superfamily domain-containing 9.	0.760

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