STRINGSTRING
gbx2 gbx2 dlx2b dlx2b fezf1 fezf1 dlx1a dlx1a lhx6 lhx6 emx3 emx3 tbr1b tbr1b nkx2.1 nkx2.1 emx1 emx1 emx2 emx2 otx1 otx1 irx1b irx1b six3a six3a satb2 satb2 fezf2 fezf2 foxg1a foxg1a otx2b otx2b cux2b cux2b lhx2b lhx2b eomesa eomesa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
gbx2Gastrulation brain homeo box 2. (342 aa)
dlx2bHomeobox protein Dlx2b. (276 aa)
fezf1Fez family zinc finger protein 1; Transcription repressor. Involved in the development of the forebrain region (By similarity); Belongs to the krueppel C2H2-type zinc-finger protein family. (429 aa)
dlx1aHomeobox protein Dlx1a. (252 aa)
lhx6LIM homeobox 6. (375 aa)
emx3Empty spiracles homeobox 3. (233 aa)
tbr1bT-box brain transcription factor 1b. (676 aa)
nkx2.1NK2 homeobox 1b. (346 aa)
emx1Homeobox protein EMX1; May function in combinations with OTX1/2 to specify cell fates in the developing central nervous system; Belongs to the EMX homeobox family. (231 aa)
emx2Empty spiracles homeobox 2. (247 aa)
otx1Homeobox protein OTX1 B; May play a role in very early embryogenesis, gastrulation, and the development and subdivision of the diencephalon and the midbrain; Belongs to the paired homeobox family. Bicoid subfamily. (323 aa)
irx1bIroquois homeobox protein 1, b. (445 aa)
six3aSine oculis homeobox homolog 3a. (294 aa)
satb2DNA-binding protein SATB. (834 aa)
fezf2Fez family zinc finger protein 2; Transcription repressor. Component of the regulatory cascade that controls the development of dopaminergic (DA) and serotonergic (5HT) neurons. (438 aa)
foxg1aForkhead box G1a. (420 aa)
otx2bHomeobox protein OTX2; May play a role in very early embryogenesis, gastrulation, and the development and subdivision of the diencephalon and the midbrain. (289 aa)
cux2bHomeobox protein cut-like. (1356 aa)
lhx2bLIM homeobox 2b. (427 aa)
eomesaT-box transcription factor eomesodermin. (661 aa)
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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