STRINGSTRING
hoxb6a hoxb6a hoxb5a hoxb5a hoxa11b hoxa11b hoxb4a hoxb4a hoxb6b hoxb6b mafba mafba pbx2 pbx2 hoxb9a hoxb9a hoxa2b hoxa2b irx7 irx7 glra4b glra4b meis2b meis2b hoxb8a hoxb8a hoxa10b hoxa10b znf703 znf703 hoxa13b hoxa13b fank1 fank1 hoxb8b hoxb8b hoxb5b hoxb5b lmo4b lmo4b hoxb7a hoxb7a hoxb3a hoxb3a jazf1b jazf1b hoxa9b hoxa9b hoxd10a hoxd10a evx2 evx2 hoxd13a hoxd13a hoxd12a hoxd12a hoxd9a hoxd9a hoxd4a hoxd4a tiparp tiparp lnpa-2 lnpa-2 umodl1 umodl1 pbx3a pbx3a meis1b meis1b hoxc4a hoxc4a hoxc8a hoxc8a hoxc11a hoxc11a pbx4 pbx4 gbx1 gbx1 hoxb1a hoxb1a hoxc9a hoxc9a hoxc6a hoxc6a pknox1.1 pknox1.1 spsb4a spsb4a hoxb2a hoxb2a hoxd3a hoxd3a hoxc5a hoxc5a hoxb1b hoxb1b meis3 meis3 hoxc3a hoxc3a hoxa5a hoxa5a hoxa1a hoxa1a hoxa13a hoxa13a R4GEC1_DANRE R4GEC1_DANRE pbx1a pbx1a lnpa lnpa hoxa3a hoxa3a hoxa9a hoxa9a and1 and1 hoxc10a hoxc10a tshz1 tshz1 tshz3b tshz3b hoxc6b hoxc6b
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
hoxb6aHomeobox protein Hox-B6a; Sequence-specific transcription factor which is part of a developmental regulatory system that provides cells with specific positional identities on the anterior-posterior axis. (228 aa)
hoxb5aHomeobox protein Hox-B5a; Sequence-specific transcription factor which is part of a developmental regulatory system that provides cells with specific positional identities on the anterior-posterior axis. (275 aa)
hoxa11bHomeobox protein Hox-A11b; Sequence-specific transcription factor which is part of a developmental regulatory system that provides cells with specific positional identities on the anterior-posterior axis. (283 aa)
hoxb4aHomeobox protein Hox-B4a; Sequence-specific transcription factor which is part of a developmental regulatory system that provides cells with specific positional identities on the anterior-posterior axis. (246 aa)
hoxb6bHomeobox protein Hox-B6b; Sequence-specific transcription factor which is part of a developmental regulatory system that provides cells with specific positional identities on the anterior-posterior axis. (224 aa)
mafbaTranscription factor MafB; May act as a transcriptional activator or repressor. Involved in neurogenesis. Involved in the development of rhombomeres (r) 5 and 6 segments from their common precursor 'proto-segment' in the hindbrain. Belongs to the bZIP family. Maf subfamily. (397 aa)
pbx2Pre-B-cell leukemia homeobox 2. (403 aa)
hoxb9aHomeobox protein Hox-B9a; Sequence-specific transcription factor which is part of a developmental regulatory system that provides cells with specific positional identities on the anterior-posterior axis. (249 aa)
hoxa2bHomeobox protein Hox-A2b; Sequence-specific transcription factor which is part of a developmental regulatory system that provides cells with specific positional identities on the anterior-posterior axis. (363 aa)
irx7Iroquois homeodomain transcription factor Ziro7. (314 aa)
glra4bGlycine receptor, alpha 4b; Belongs to the ligand-gated ion channel (TC 1.A.9) family. (537 aa)
meis2bMyeloid ecotropic viral integration site 2.1. (393 aa)
hoxb8aHomeobox protein Hox-B8a; Sequence-specific transcription factor which is part of a developmental regulatory system that provides cells with specific positional identities on the anterior-posterior axis. (245 aa)
hoxa10bHomeobox protein Hox-A10b; Sequence-specific transcription factor which is part of a developmental regulatory system that provides cells with specific positional identities on the anterior-posterior axis. (330 aa)
znf703Zinc finger protein 703; Transcriptional corepressor which does not bind directly to DNA and may regulate transcription through recruitment of histone deacetylases to gene promoters. Required for segmental gene expression during hindbrain development. May regulate cell adhesion, migration and proliferation. (589 aa)
hoxa13bHomeobox protein Hox-A13b; Sequence-specific transcription factor which is part of a developmental regulatory system that provides cells with specific positional identities on the anterior-posterior axis; Belongs to the Abd-B homeobox family. (289 aa)
fank1Fibronectin type III and ankyrin repeat domains 1. (336 aa)
hoxb8bHomeobox protein Hox-B8b; Sequence-specific transcription factor which is part of a developmental regulatory system that provides cells with specific positional identities on the anterior-posterior axis. (247 aa)
hoxb5bHomeobox protein Hox-B5b; Sequence-specific transcription factor which is part of a developmental regulatory system that provides cells with specific positional identities on the anterior-posterior axis. (276 aa)
lmo4bLIM domain only 4, like. (165 aa)
hoxb7aHomeobox protein Hox-B7a; Sequence-specific transcription factor which is part of a developmental regulatory system that provides cells with specific positional identities on the anterior-posterior axis. (227 aa)
hoxb3aHomeobox protein Hox-B3a; Sequence-specific transcription factor which is part of a developmental regulatory system that provides cells with specific positional identities on the anterior-posterior axis. (417 aa)
jazf1bZinc finger protein Seson. (243 aa)
hoxa9bHomeobox protein Hox-A9b; Sequence-specific transcription factor which is part of a developmental regulatory system that provides cells with specific positional identities on the anterior-posterior axis; Belongs to the Abd-B homeobox family. (253 aa)
hoxd10aHomeobox protein Hox-D10a; Sequence-specific transcription factor which is part of a developmental regulatory system that provides cells with specific positional identities on the anterior-posterior axis. (332 aa)
evx2Even-skipped homeobox 2. (418 aa)
hoxd13aHomeobox protein Hox-D13a; Sequence-specific transcription factor which is part of a developmental regulatory system that provides cells with specific positional identities on the anterior-posterior axis. (256 aa)
hoxd12aHomeobox protein Hox-D12a; Sequence-specific transcription factor which is part of a developmental regulatory system that provides cells with specific positional identities on the anterior-posterior axis. (277 aa)
hoxd9aHomeobox protein Hox-D9a; Sequence-specific transcription factor which is part of a developmental regulatory system that provides cells with specific positional identities on the anterior-posterior axis; Belongs to the Abd-B homeobox family. (262 aa)
hoxd4aHomeobox protein Hox-D4a; Sequence-specific transcription factor which is part of a developmental regulatory system that provides cells with specific positional identities on the anterior-posterior axis. (256 aa)
tiparpTCDD-inducible poly(ADP-ribose) polymerase. (279 aa)
lnpa-2Limb and neural patterns a. (130 aa)
umodl1Uromodulin-like 1. (950 aa)
pbx3aPre-B-cell leukemia homeobox 3a. (413 aa)
meis1bMyeloid ecotropic viral integration 1. (388 aa)
hoxc4aHomeobox protein Hox-C4a; Sequence-specific transcription factor which is part of a developmental regulatory system that provides cells with specific positional identities on the anterior-posterior axis. (268 aa)
hoxc8aHomeobox protein Hox-C8a; Sequence-specific transcription factor which is part of a developmental regulatory system that provides cells with specific positional identities on the anterior-posterior axis. (250 aa)
hoxc11aHomeobox protein Hox-C11a; Sequence-specific transcription factor which is part of a developmental regulatory system that provides cells with specific positional identities on the anterior-posterior axis. Belongs to the Abd-B homeobox family. (306 aa)
pbx4Pre-B-cell leukemia transcription factor 4. (343 aa)
gbx1Gastrulation brain homeobox 1. (316 aa)
hoxb1aHomeobox protein Hox-B1a; Sequence-specific transcription factor which is part of a developmental regulatory system that provides cells with specific positional identities on the anterior-posterior axis. (316 aa)
hoxc9aHomeobox protein Hox-C9a; Sequence-specific transcription factor which is part of a developmental regulatory system that provides cells with specific positional identities on the anterior-posterior axis. (270 aa)
hoxc6aHomeobox protein Hox-C6a; Sequence-specific transcription factor which is part of a developmental regulatory system that provides cells with specific positional identities on the anterior-posterior axis. (208 aa)
pknox1.1Homeodomain transcription factor Prep1. (433 aa)
spsb4aSplA/ryanodine receptor domain and SOCS box-containing 4a. (277 aa)
hoxb2aHomeobox protein Hox-B2a; Sequence-specific transcription factor which is part of a developmental regulatory system that provides cells with specific positional identities on the anterior-posterior axis. Plays an important role in the patterning of hindbrain and pharyngeal arches. (409 aa)
hoxd3aHomeobox protein Hox-D3a; Sequence-specific transcription factor which is part of a developmental regulatory system that provides cells with specific positional identities on the anterior-posterior axis. (396 aa)
hoxc5aHomeobox protein Hox-C5a; Sequence-specific transcription factor which is part of a developmental regulatory system that provides cells with specific positional identities on the anterior-posterior axis. (213 aa)
hoxb1bHomeobox protein Hox-B1b; Sequence-specific transcription factor. Part of a developmental regulatory system that provides cells with specific positional identities on the anterior-posterior axis. Acts on the anterior body structures. Seems to act in the maintenance and/or generation of hindbrain segments; Belongs to the Antp homeobox family. Labial subfamily. (229 aa)
meis3Myeloid ecotropic viral integration site 3. (415 aa)
hoxc3aHomeobox protein Hox-C3a; Sequence-specific transcription factor which is part of a developmental regulatory system that provides cells with specific positional identities on the anterior-posterior axis; Belongs to the Antp homeobox family. (257 aa)
hoxa5aHomeobox protein Hox-A5a; Sequence-specific transcription factor which is part of a developmental regulatory system that provides cells with specific positional identities on the anterior-posterior axis; Belongs to the Antp homeobox family. (265 aa)
hoxa1aHomeobox protein Hox-A1a; Sequence-specific transcription factor. Part of a developmental regulatory system that provides cells with specific positional identities on the anterior-posterior axis (By similarity). (329 aa)
hoxa13aHomeobox protein Hox-A13a; Sequence-specific transcription factor which is part of a developmental regulatory system that provides cells with specific positional identities on the anterior-posterior axis; Belongs to the Abd-B homeobox family. (310 aa)
R4GEC1_DANREHox9_act domain-containing protein. (162 aa)
pbx1aPre-B-cell leukemia transcription factor 1a. (428 aa)
lnpaEndoplasmic reticulum junction formation protein lunapark-A; Endoplasmic reticulum (ER)-shaping membrane protein that plays a role in determining ER morphology. Involved in the stabilization of nascent three-way ER tubular junctions within the ER network. May also play a role as a curvature-stabilizing protein within three-way ER tubular junction network (By similarity). (246 aa)
hoxa3aHomeobox protein Hox-A3a; Sequence-specific transcription factor which is part of a developmental regulatory system that provides cells with specific positional identities on the anterior-posterior axis; Belongs to the Antp homeobox family. (410 aa)
hoxa9aHomeobox protein Hox-A9a; Sequence-specific transcription factor which is part of a developmental regulatory system that provides cells with specific positional identities on the anterior-posterior axis. (250 aa)
and1Actinodin1. (570 aa)
hoxc10aHomeobox C10a. (337 aa)
tshz1Teashirt homolog 1; Probable transcriptional regulator involved in developmental processes. May act as a transcriptional repressor (Potential). Belongs to the teashirt C2H2-type zinc-finger protein family. (1158 aa)
tshz3bTeashirt zinc finger homeobox 3b. (1159 aa)
hoxc6bHomeobox protein Hox-C6b; Sequence-specific transcription factor which is part of a developmental regulatory system that provides cells with specific positional identities on the anterior-posterior axis. (228 aa)
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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