STRINGSTRING
smurf1 smurf1 acvr1ba acvr1ba smad7 smad7 smad3b smad3b acvrl1 acvrl1 smad3a smad3a smad5 smad5 smurf2 smurf2 foxh1 foxh1 gdf2 gdf2 bmp10 bmp10 smad6b smad6b skia skia smad4a smad4a gb:cr929477 gb:cr929477 skilb skilb acvr2ba acvr2ba smad2 smad2 bmpr2b bmpr2b smad6a smad6a Q1L8R8_DANRE Q1L8R8_DANRE E7FFZ5_DANRE E7FFZ5_DANRE smad9 smad9
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
smurf1E3 ubiquitin-protein ligase. (731 aa)
acvr1baReceptor protein serine/threonine kinase; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily. (505 aa)
smad7Mothers against decapentaplegic homolog. (372 aa)
smad3bMothers against decapentaplegic homolog. (423 aa)
acvrl1Receptor protein serine/threonine kinase; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily. (499 aa)
smad3aMothers against decapentaplegic homolog. (425 aa)
smad5Mothers against decapentaplegic homolog 5; Involved in ventralization. May mediate Bmp2b signaling during early phases of embryonic dorsal-ventral pattern formation. Required for initiation of Smad1 expression during gastrulation. Belongs to the dwarfin/SMAD family. (464 aa)
smurf2E3 ubiquitin-protein ligase SMURF2; E3 ubiquitin-protein ligase which accepts ubiquitin from an E2 ubiquitin-conjugating enzyme in the form of a thioester and then directly transfers the ubiquitin to targeted substrates. (765 aa)
foxh1Forkhead box protein H1; Transcriptional activator. Activates an activin response element (ARE). Recognizes and binds to the DNA sequence 5'- TGT[GT][GT]ATT-3'. Modulator of nodal signaling required for organizer formation. Also required for the development of dorsal axial structures and left-right symmetry. (472 aa)
gdf2Growth/differentiation factor 2; Potent circulating inhibitor of angiogenesis. Signals through the type I activin receptor ACVRL1 but not other Alks. Signaling through SMAD1 in endothelial cells requires TGF-beta coreceptor endoglin/eng. (389 aa)
bmp10Bone morphogenetic protein 10. (485 aa)
smad6bMothers against decapentaplegic homolog. (486 aa)
skiaV-ski avian sarcoma viral oncogene homolog a. (727 aa)
smad4aMothers against decapentaplegic homolog. (547 aa)
gb:cr929477SMAD family member 4. (332 aa)
skilbSKI-like proto-oncogene b. (624 aa)
acvr2baSerine/threonine-protein kinase receptor; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily. (509 aa)
smad2Mothers against decapentaplegic homolog 2; Promotes differentiation of dorsal tissues. May be involved in the mediation of Ndr2 signaling during mesoderm and axis formation during embryogenesis. (469 aa)
bmpr2bReceptor protein serine/threonine kinase; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily. (1071 aa)
smad6aMothers against decapentaplegic homolog. (456 aa)
Q1L8R8_DANREMothers against decapentaplegic homolog. (571 aa)
E7FFZ5_DANREMothers against decapentaplegic homolog. (568 aa)
smad9Mothers against decapentaplegic homolog. (466 aa)
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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