STRINGSTRING
tnfa tnfa tnfsf10 tnfsf10 tnfsf12 tnfsf12 furinb furinb cd40lg cd40lg tnfrsf18 tnfrsf18 tnfsf10l3 tnfsf10l3 cd40 cd40 ENSDARP00000140253 ENSDARP00000140253 tnfsf13b tnfsf13b tnfsf18 tnfsf18 tnfsf14 tnfsf14
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
tnfaTumor necrosis factor a (TNF superfamily, member 2). (234 aa)
tnfsf10Tumor necrosis factor (Ligand) superfamily, member 10 like 2; Belongs to the tumor necrosis factor family. (299 aa)
tnfsf12Tumor necrosis factor superfamily member 12; Belongs to the tumor necrosis factor family. (236 aa)
furinbFurin (paired basic amino acid cleaving enzyme) b; Belongs to the peptidase S8 family. (823 aa)
cd40lgCD40 ligand; Belongs to the tumor necrosis factor family. (260 aa)
tnfrsf18Tumor necrosis factor receptor superfamily, member 18. (261 aa)
tnfsf10l3Tumor necrosis factor (ligand) superfamily, member 10-like 3; Belongs to the tumor necrosis factor family. (289 aa)
cd40CD40 molecule, TNF receptor superfamily member 5. (286 aa)
ENSDARP00000140253Si:dkeyp-61b2.1. (444 aa)
tnfsf13bTNF superfamily member 13b; Belongs to the tumor necrosis factor family. (268 aa)
tnfsf18TNF superfamily member 18; Belongs to the tumor necrosis factor family. (202 aa)
tnfsf14TNF superfamily member 14; Belongs to the tumor necrosis factor family. (235 aa)
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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