STRINGSTRING
cxcr5 cxcr5 cxcr2 cxcr2 cxcl18b cxcl18b cxcl14 cxcl14 ccl19b ccl19b ccr7 ccr7 cxcl8b.1 cxcl8b.1 cxcl19 cxcl19 cxcl8a cxcl8a ccl34a.4 ccl34a.4 CXCL8 CXCL8 cxcr1 cxcr1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
cxcr5Chemokine (C-X-C motif) receptor 5; Belongs to the G-protein coupled receptor 1 family. (378 aa)
cxcr2Chemokine (C-X-C motif) receptor 2; Belongs to the G-protein coupled receptor 1 family. (340 aa)
cxcl18bChemokine (C-X-C motif) ligand 18b. (114 aa)
cxcl14Chemokine (C-X-C motif) ligand 14. (100 aa)
ccl19bChemokine (C-C motif) ligand 19b. (128 aa)
ccr7Chemokine (C-C motif) receptor 7; Belongs to the G-protein coupled receptor 1 family. (385 aa)
cxcl8b.1Interleukin-8; Belongs to the intercrine alpha (chemokine CxC) family. (118 aa)
cxcl19Chemokine (C-X-C motif) ligand 19. (101 aa)
cxcl8aInterleukin-8; Belongs to the intercrine alpha (chemokine CxC) family. (98 aa)
ccl34a.4Chemokine (C-C motif) ligand 34a, duplicate 4. (138 aa)
CXCL8Interleukin-8; Belongs to the intercrine alpha (chemokine CxC) family. (105 aa)
cxcr1Chemokine (C-X-C motif) receptor 1; Belongs to the G-protein coupled receptor 1 family. (364 aa)
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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